RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 MTFR1Q15390 333 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CCDC38Q502W7 563 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 NUGGCQ68CJ6 796 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 AADACL2Q6P093 401 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 RHBDF2Q6PJF5 856 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SYDE1Q6ZW31 735 aaPredicted RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 NBPF5PQ86XG9 351 aaPredicted RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 ADGRA3Q8IWK6 1321 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SPICE1Q8N0Z3 855 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 FITM2Q8N6M3 262 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 UHMK1Q8TAS1 419 aaKnown RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 FBF1Q8TES7 1133 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 C7orf43Q8WVR3 580 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 KAT6BQ8WYB5 2073 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SAAL1Q96ER3 474 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 FAM20AQ96MK3 541 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 GREB1LQ9C091 1923 aaPredicted RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 LRRC19Q9H756 370 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SPATS2LQ9NUQ6 558 aaKnown RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 DMAC2Q9NW81 257 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CTTNBP2NLQ9P2B4 639 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 KLHL14Q9P2G3 628 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CTNNAL1Q9UBT7 734 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 ACTL7BQ9Y614 415 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SPATA31A5Q5VU36 1347 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SPATA31A6Q5VVP1 1343 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SPATA31A7Q8IWB4 1347 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 A8MUI8 341 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 RSPH10B2B2RC85 870 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 USP17L10C9JJH3 530 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 RSPH10BP0C881 870 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 COMTP21964 271 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 MARCKSL1P49006 195 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 ARHGAP4P98171 946 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CAV1Q03135 178 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 SF3A3Q12874 501 aaKnown RBP eCLIP7.83□□□□□ -1.16
USP48-206ENST00000464577 GRAPQ13588 217 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 MYBPC2Q14324 1141 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 LRRC14Q15048 493 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 DDB1Q16531 1140 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 LONRF1Q17RB8 773 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 TTBK2Q6IQ55 1244 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CGB2Q6NT52 195 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 DPP8Q6V1X1 898 aaPredicted RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 PPP1R21Q6ZMI0 780 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 ARHGEF18Q6ZSZ5 1173 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 MIGA2Q7L4E1 593 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 PALB2Q86YC2 1186 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CCDC105Q8IYK2 499 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 AGGF1Q8N302 714 aaeCLIP7.83□□□□□ -1.16
USP48-206ENST00000464577 KIF2BQ8N4N8 673 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 LINC00116Q8NCU8 138 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CFAP61Q8NHU2 1237 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 GRAPLQ8TC17 118 aaPredicted RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 SH3TC2Q8TF17 1288 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 ZNF483Q8TF39 744 aaPredicted RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 SETDB2Q96T68 719 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 LRMDAQ9H2I8 198 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 AAASQ9NRG9 546 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 ANKIB1Q9P2G1 1089 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 NARFQ9UHQ1 456 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 PNMA3Q9UL41 463 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 RTCBQ9Y3I0 505 aaKnown RBP7.83□□□□□ -1.16
USP48-206ENST00000464577 MEIS1O00470 390 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 FAM13AO94988 1023 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 FTLP02792 175 aaPredicted RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 BCRP11274 1271 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 IL1R1P14778 569 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 GNAZP19086 355 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 ITIH2P19823 946 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 CIITAP33076 1130 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 MAN1A1P33908 653 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 STRN3Q13033 797 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 CBWD6Q4V339 395 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 CBWD3Q5JTY5 395 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 SPDYAQ5MJ70 313 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 CBWD5Q5RIA9 395 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 TPTE2Q6XPS3 522 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 STXBP4Q6ZWJ1 553 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 SLC9A9Q8IVB4 645 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 MGARPQ8TDB4 240 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 INPP5DQ92835 1189 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 LENG9Q96B70 501 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 RMDN2Q96LZ7 410 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 TMEM237Q96Q45 408 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 TGS1Q96RS0 853 aaKnown RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 SH3GL3Q99963 347 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 DDX23Q9BUQ8 820 aaKnown RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 BHMT2Q9H2M3 363 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 SEPT11Q9NVA2 429 aaKnown RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 ZFATQ9P243 1243 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 SEL1LQ9UBV2 794 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 GGT7Q9UJ14 662 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 VAV3Q9UKW4 847 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 RPL26L1Q9UNX3 145 aaKnown RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 STK38LQ9Y2H1 464 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 FRMD4BQ9Y2L6 1034 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 THRAP3Q9Y2W1 955 aaKnown RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 RABGAP1Q9Y3P9 1069 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms