RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 A0A087X0B3 334 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 ITGA4P13612 1032 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 PTPROQ16827 1216 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 NOMO2Q5JPE7 1267 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 NT5DC1Q5TFE4 455 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 SLC27A1Q6PCB7 646 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 PDILTQ8N807 584 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 COLGALT1Q8NBJ5 622 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 CNNM3Q8NE01 707 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 ZHX3Q9H4I2 956 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 AAASQ9NRG9 546 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 LMCD1Q9NZU5 365 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 PLAGL2Q9UPG8 496 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 PCDHB12Q9Y5F1 795 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 TRANK1O15050 2925 aa18.76■□□□□ 0.59
VPS52-215ENST00000464425 ITGB1P05556 798 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 PBX3P40426 434 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 AFF1P51825 1210 aaKnown RBP18.75■□□□□ 0.59
VPS52-215ENST00000464425 GIT2Q14161 759 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 SKIV2LQ15477 1246 aaKnown RBP18.75■□□□□ 0.59
VPS52-215ENST00000464425 CSPP1Q1MSJ5 1256 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 NAALADL2Q58DX5 795 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 SHC4Q6S5L8 630 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 CCDC73Q6ZRK6 1079 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 SPIRE2Q8WWL2 714 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 MRPL38Q96DV4 380 aaKnown RBP18.75■□□□□ 0.59
VPS52-215ENST00000464425 MRPL9Q9BYD2 267 aaKnown RBP18.75■□□□□ 0.59
VPS52-215ENST00000464425 NXF3Q9H4D5 531 aaKnown RBP18.75■□□□□ 0.59
VPS52-215ENST00000464425 PDZD7Q9H5P4 517 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 RSAD1Q9HA92 442 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 ARHGAP28Q9P2N2 729 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 STK17AQ9UEE5 414 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 NLRC5Q86WI3 1866 aa18.75■□□□□ 0.59
VPS52-215ENST00000464425 COL4A4P53420 1690 aaPredicted RBP18.74■□□□□ 0.59
VPS52-215ENST00000464425 N4BP3O15049 544 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 FAM13AO94988 1023 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 LAG3P18627 525 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 CMA1P23946 247 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 AKAP5P24588 427 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 STAT6P42226 847 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 SMTNP53814 917 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 EEF1DP3Q658K8 133 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 SV2BQ7L1I2 683 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 TAS1R3Q7RTX0 852 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 THNSL1Q8IYQ7 743 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 MYCT1Q8N699 235 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 SPPL3Q8TCT6 385 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 P2RX5Q93086 422 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 NTPCRQ9BSD7 190 aaKnown RBP18.74■□□□□ 0.59
VPS52-215ENST00000464425 GBP3Q9H0R5 595 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 TMEM134Q9H6X4 195 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 GDPD2Q9HCC8 539 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 PRDM6Q9NQX0 595 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 TBC1D13Q9NVG8 400 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 KCNG1Q9UIX4 513 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 ODF2LQ9ULJ1 636 aa18.74■□□□□ 0.59
VPS52-215ENST00000464425 MYO7AQ13402 2215 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 A0A1W2PQ27 194 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 A0A1W2PQ64 194 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 A0A1W2PQD8 194 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 FGF18O76093 207 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 POMCP01189 267 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 DNAJB1P25685 340 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 RNASELQ05823 741 aaKnown RBP18.73■□□□□ 0.59
VPS52-215ENST00000464425 ATF7IP2Q5U623 682 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 RESP18Q5W5W9 173 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 KCNT2Q6UVM3 1135 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 DYMQ7RTS9 669 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 HACE1Q8IYU2 909 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 TMEM161BQ8NDZ6 487 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 URGCPQ8TCY9 931 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 ZNF558Q96NG5 402 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 GAD1Q99259 594 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 UBN1Q9NPG3 1134 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 LARSQ9P2J5 1176 aaKnown RBP18.73■□□□□ 0.59
VPS52-215ENST00000464425 PARP2Q9UGN5 583 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 RALGAPA2Q2PPJ7 1873 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 PHLPP2Q6ZVD8 1323 aa18.73■□□□□ 0.59
VPS52-215ENST00000464425 ARL5CA6NH57 179 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 MYMKA6NI61 221 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 NT5C1B-RDH14C9J2C7 533 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.59
VPS52-215ENST00000464425 TBCAO75347 108 aaKnown RBP18.72■□□□□ 0.59
VPS52-215ENST00000464425 MLH1P40692 756 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 BCAR1P56945 870 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 CAMK1Q14012 370 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 ZNF280BQ86YH2 543 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 TMEM87AQ8NBN3 555 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 SLC17A8Q8NDX2 589 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 POF1BQ8WVV4 589 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 ZFP42Q96MM3 310 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 ADPGKQ9BRR6 497 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 TARS2Q9BW92 718 aaKnown RBP18.72■□□□□ 0.59
VPS52-215ENST00000464425 MRPL4Q9BYD3 311 aaKnown RBP18.72■□□□□ 0.59
VPS52-215ENST00000464425 NRDE2Q9H7Z3 1164 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 PARVGQ9HBI0 331 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 FAM13BQ9NYF5 915 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 KLK14Q9P0G3 267 aa18.72■□□□□ 0.59
VPS52-215ENST00000464425 MAPTP10636 758 aaKnown RBP18.71■□□□□ 0.59
VPS52-215ENST00000464425 ALDH7A1P49419 539 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms