RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TCP11Q8WWU5 503 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 STAMQ92783 540 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 TMEM143Q96AN5 459 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 CCDC51Q96ER9 411 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 ZNF274Q96GC6 653 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-209ENST00000463631 CEP170P1Q96L14 293 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 ZSWIM6Q9HCJ5 1215 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
HMGN1-209ENST00000463631 EPS15L1Q9UBC2 864 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 FBXL21Q9UKT6 434 aa19.31■□□□□ 0.68
HMGN1-209ENST00000463631 TDRD15B5MCY1 1934 aaKnown RBP19.31■□□□□ 0.68
HMGN1-209ENST00000463631 CLUHO75153 1309 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 TBX3O15119 743 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 TEX28O15482 410 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 ASAP2O43150 1006 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
HMGN1-209ENST00000463631 PI15O43692 258 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 GLUD1P00367 558 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 SRGAP2CP0DJJ0 459 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 GLUD2P49448 558 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 EMC2Q15006 297 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 KIAA0319Q5VV43 1072 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 FERMT3Q86UX7 667 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 GPR65Q8IYL9 337 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 SIX5Q8N196 739 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 DTWD2Q8NBA8 298 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 RNF149Q8NC42 400 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 HDAC7Q8WUI4 952 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 AIFM3Q96NN9 605 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 LXNQ9BS40 222 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 RXFP1Q9HBX9 757 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 WNT16Q9UBV4 365 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 PRG3Q9Y2Y8 225 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-209ENST00000463631 IPPQ9Y573 584 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 ZMYM2Q9UBW7 1377 aa19.3■□□□□ 0.68
HMGN1-209ENST00000463631 OTOGLQ3ZCN5 2332 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 ARL5CA6NH57 179 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 ERLIN2O94905 339 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 ITGA4P13612 1032 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 AXLP30530 894 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 YWHABP31946 246 aaKnown RBP19.29■□□□□ 0.68
HMGN1-209ENST00000463631 AK2P54819 239 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 ANGPT1Q15389 498 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 NOTUMQ6P988 496 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 CPLX2Q6PUV4 134 aaKnown RBP19.29■□□□□ 0.68
HMGN1-209ENST00000463631 NEK8Q86SG6 692 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 IFNLR1Q8IU57 520 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-209ENST00000463631 NXPE3Q969Y0 559 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 DMXL1Q9Y485 3027 aa19.29■□□□□ 0.68
HMGN1-209ENST00000463631 MTCL1Q9Y4B5 1905 aaKnown RBP19.29■□□□□ 0.68
HMGN1-209ENST00000463631 CEP250Q9BV73 2442 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 C2CD2LO14523 706 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 TSPAN1O60635 241 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 DSG1Q02413 1049 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 POU5F1BQ06416 359 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 SPIRE1Q08AE8 756 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 EPHA7Q15375 998 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 OTUD6AQ7L8S5 288 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 ERMP1Q7Z2K6 904 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 HAS1Q92839 578 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 CHST7Q9NS84 486 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 FRYLO94915 3013 aa19.28■□□□□ 0.68
HMGN1-209ENST00000463631 CCDC195A0A1B0GUA6 201 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 CCDC194A0A1B0GVG4 234 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 NARSO43776 548 aaKnown RBP19.27■□□□□ 0.68
HMGN1-209ENST00000463631 MLH1P40692 756 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 PTENP60484 403 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 MXD4Q14582 209 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-209ENST00000463631 TAS1R1Q7RTX1 841 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 ADSSL1Q8N142 457 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 ZNF707Q96C28 371 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-209ENST00000463631 GAD1Q99259 594 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 NAP1L4Q99733 375 aaKnown RBP19.27■□□□□ 0.68
HMGN1-209ENST00000463631 EIF2AQ9BY44 585 aaKnown RBP19.27■□□□□ 0.68
HMGN1-209ENST00000463631 TM6SF1Q9BZW5 370 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-209ENST00000463631 PLEKHA4Q9H4M7 779 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 CYP46A1Q9Y6A2 500 aa19.27■□□□□ 0.68
HMGN1-209ENST00000463631 RFPL2O75678 378 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 SRFP11831 508 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 GBP2P32456 591 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-209ENST00000463631 OR1G1P47890 313 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 SMG7Q92540 1137 aaKnown RBP19.26■□□□□ 0.67
HMGN1-209ENST00000463631 ZFP42Q96MM3 310 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 MYADMQ96S97 322 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 MTRQ99707 1265 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 CSRNP2Q9H175 543 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 SEMA4AQ9H3S1 761 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 XPNPEP1Q9NQW7 623 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.26■□□□□ 0.67
HMGN1-209ENST00000463631 BMP2KQ9NSY1 1161 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-209ENST00000463631 ZDHHC7Q9NXF8 308 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 KCNJ14Q9UNX9 436 aa19.26■□□□□ 0.67
HMGN1-209ENST00000463631 STK36Q9NRP7 1315 aa19.25■□□□□ 0.67
HMGN1-209ENST00000463631 KRBA1A5PL33 1030 aa19.25■□□□□ 0.67
HMGN1-209ENST00000463631 NR1I2O75469 434 aa19.25■□□□□ 0.67
HMGN1-209ENST00000463631 SCNN1GP51170 649 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms