RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CNNM3Q8NE01 707 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 DDX12PQ92771 950 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 SPATA32Q96LK8 384 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 GAS2L1Q99501 681 aaPredicted RBP19.48■□□□□ 0.71
VPS52-214ENST00000463486 ACO2Q99798 780 aaKnown RBP19.48■□□□□ 0.71
VPS52-214ENST00000463486 PLVAPQ9BX97 442 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 NXF3Q9H4D5 531 aaKnown RBP19.48■□□□□ 0.71
VPS52-214ENST00000463486 KBTBD4Q9NVX7 518 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 LARSQ9P2J5 1176 aaKnown RBP19.48■□□□□ 0.71
VPS52-214ENST00000463486 KCNG1Q9UIX4 513 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 ATP6V1DQ9Y5K8 247 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 TCHHQ07283 1943 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 COL4A4P53420 1690 aaPredicted RBP19.48■□□□□ 0.71
VPS52-214ENST00000463486 PHLPP2Q6ZVD8 1323 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 MYO7AQ13402 2215 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 MYH11P35749 1972 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 B4GALT3O60512 393 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 NPTXRO95502 500 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 LIG1P18858 919 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 PROZP22891 400 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 CTNNB1P35222 781 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 GPM6BQ13491 265 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 CAMK1Q14012 370 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 ADALQ6DHV7 355 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 GSTCDQ8NEC7 633 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 P2RX5Q93086 422 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 PGBD4Q96DM1 585 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 PARVGQ9HBI0 331 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 TNFSF13BQ9Y275 285 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 RWDD3Q9Y3V2 267 aa19.47■□□□□ 0.71
VPS52-214ENST00000463486 FAM237AA0A1B0GTK4 181 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 FRMD3A2A2Y4 597 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 N4BP3O15049 544 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 GRM6O15303 877 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 CMA1P23946 247 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 SMTNP53814 917 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 NOMO2Q5JPE7 1267 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 ATF7IP2Q5U623 682 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 GLB1LQ6UWU2 654 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 DYMQ7RTS9 669 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 HAUS6Q7Z4H7 955 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 LRRC43Q8N309 656 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 MYCT1Q8N699 235 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 RSPH1Q8WYR4 309 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 TARS2Q9BW92 718 aaKnown RBP19.46■□□□□ 0.71
VPS52-214ENST00000463486 STRA6Q9BX79 667 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 SCAND2PQ9GZW5 306 aaPredicted RBP19.46■□□□□ 0.71
VPS52-214ENST00000463486 RSAD1Q9HA92 442 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 TBC1D13Q9NVG8 400 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 MIOSQ9NXC5 875 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 LMCD1Q9NZU5 365 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 PLAGL2Q9UPG8 496 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 HPSEQ9Y251 543 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 XIRP2A4UGR9 3374 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 UNC80Q8N2C7 3258 aa19.46■□□□□ 0.71
VPS52-214ENST00000463486 A0A0C4DFX4 3053 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 POLR2DO15514 142 aaKnown RBP19.45■□□□□ 0.7
VPS52-214ENST00000463486 TRAK2O60296 914 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 FAM13AO94988 1023 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 ITGB1P05556 798 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 ITGA4P13612 1032 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 IGFBP4P22692 258 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 AKAP5P24588 427 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 DNAJB1P25685 340 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 CNNM4Q6P4Q7 775 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 ZNF280BQ86YH2 543 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 ABI1Q8IZP0 508 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 IQUBQ8NA54 791 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 KLHL23Q8NBE8 558 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 COLGALT1Q8NBJ5 622 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 SPPL3Q8TCT6 385 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 STAMQ92783 540 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 DHX58Q96C10 678 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 CXCL16Q9H2A7 254 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 TNMDQ9H2S6 317 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 CUEDC2Q9H467 287 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 ST6GALNAC4Q9H4F1 302 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 UBN1Q9NPG3 1134 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 KCNH3Q9ULD8 1083 aa19.45■□□□□ 0.7
VPS52-214ENST00000463486 ARL5CA6NH57 179 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 DDHD2O94830 711 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 KRT18P05783 430 aaKnown RBP19.44■□□□□ 0.7
VPS52-214ENST00000463486 NMT1P30419 496 aaKnown RBP19.44■□□□□ 0.7
VPS52-214ENST00000463486 GTF2BQ00403 316 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 MAFAQ8NHW3 353 aaPredicted RBP19.44■□□□□ 0.7
VPS52-214ENST00000463486 ZFP42Q96MM3 310 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 GAD1Q99259 594 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 C11orf84Q9BUA3 381 aaPredicted RBP19.44■□□□□ 0.7
VPS52-214ENST00000463486 MRPL9Q9BYD2 267 aaKnown RBP19.44■□□□□ 0.7
VPS52-214ENST00000463486 MRPL4Q9BYD3 311 aaKnown RBP19.44■□□□□ 0.7
VPS52-214ENST00000463486 NRDE2Q9H7Z3 1164 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 GDPD2Q9HCC8 539 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 ALG13Q9NP73 1137 aaKnown RBP19.44■□□□□ 0.7
VPS52-214ENST00000463486 GIT1Q9Y2X7 761 aa19.44■□□□□ 0.7
VPS52-214ENST00000463486 TBCAO75347 108 aaKnown RBP19.43■□□□□ 0.7
VPS52-214ENST00000463486 PPP1R37O75864 691 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 PBX3P40426 434 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 KCNT2Q6UVM3 1135 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 ZPBP2Q6X784 338 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 ZNF720Q7Z2F6 126 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms