RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 FSCN2O14926 492 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 N4BP3O15049 544 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 STX6O43752 255 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 HSP90AA1P07900 732 aaKnown RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 GTF2F1P35269 517 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 NRIP1P48552 1158 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 DMP1Q13316 513 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 BMS1Q14692 1282 aaKnown RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 TMEM119Q4V9L6 283 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 CDR2LQ86X02 465 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 SYT2Q8N9I0 419 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 TCF25Q9BQ70 676 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 ADPGKQ9BRR6 497 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 CCDC113Q9H0I3 377 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 NXF3Q9H4D5 531 aaKnown RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 ZSCAN16Q9H4T2 348 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 C17orf75Q9HAS0 396 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 KCND2Q9NZV8 630 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 DAXXQ9UER7 740 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 GIT1Q9Y2X7 761 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 HES2Q9Y543 173 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 PCDHGC5Q9Y5F6 944 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 CLIC4Q9Y696 253 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 TCF20Q9UGU0 1960 aaKnown RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 ARL5CA6NH57 179 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 K7ERI5 159 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 POMCP01189 267 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 GALTP07902 379 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 PLA2G4BP0C869 781 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 GUCY2CP25092 1073 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 MLH1P40692 756 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
COL1A1-202ENST00000463440 PEX3P56589 373 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 ADAM15Q13444 863 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 PLPP4Q5VZY2 271 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 TMC7Q7Z402 723 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
COL1A1-202ENST00000463440 ZNF280BQ86YH2 543 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 EFHBQ8N7U6 833 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 RASSF8Q8NHQ8 419 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-202ENST00000463440 GAD1Q99259 594 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 CDCA3Q99618 268 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-202ENST00000463440 TMEM175Q9BSA9 504 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 KIFC3Q9BVG8 833 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 DNAJB4Q9UDY4 337 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 KCNG1Q9UIX4 513 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 FAM50BQ9Y247 325 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 PHLPP2Q6ZVD8 1323 aa17.9■□□□□ 0.46
COL1A1-202ENST00000463440 TTC28Q96AY4 2481 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 INPPL1O15357 1258 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 DDHD2O94830 711 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 ALDH2P05091 517 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 LTBRP36941 435 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 NPTX2P47972 431 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 SLC11A1P49279 550 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 NDUFV1P49821 464 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 PTCRAQ6ISU1 281 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-202ENST00000463440 DAW1Q8N136 415 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 IGSF21Q96ID5 467 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 PDZD7Q9H5P4 517 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 KMT5AQ9NQR1 393 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 PARP2Q9UGN5 583 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 FAN1Q9Y2M0 1017 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 RBM19Q9Y4C8 960 aaKnown RBP17.89■□□□□ 0.45
COL1A1-202ENST00000463440 ZMYM2Q9UBW7 1377 aa17.89■□□□□ 0.45
COL1A1-202ENST00000463440 TTLL13PA6NNM8 815 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 LINC01565O15544 149 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 PDIA4P13667 645 aaKnown RBP17.88■□□□□ 0.45
COL1A1-202ENST00000463440 AKAP5P24588 427 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 SCNN1GP51170 649 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 SLC12A3P55017 1021 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 GRIN1Q05586 938 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 MAPK7Q13164 816 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 SMC1AQ14683 1233 aaKnown RBP17.88■□□□□ 0.45
COL1A1-202ENST00000463440 PTPAQ15257 358 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 DUSP6Q16828 381 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 FAM173BQ6P4H8 233 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 APBB1IPQ7Z5R6 666 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-202ENST00000463440 DDX53Q86TM3 631 aaKnown RBP17.88■□□□□ 0.45
COL1A1-202ENST00000463440 TMEM134Q9H6X4 195 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 STK39Q9UEW8 545 aa17.88■□□□□ 0.45
COL1A1-202ENST00000463440 XIRP2A4UGR9 3374 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 GRXCR2A6NFK2 248 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 SFI1A8K8P3 1242 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 PER2O15055 1255 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 B4GALT3O60512 393 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 TBX10O75333 385 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 NR1I2O75469 434 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 MARCKSP29966 332 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-202ENST00000463440 CA8P35219 290 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 CEBPZQ03701 1054 aaKnown RBP17.87■□□□□ 0.45
COL1A1-202ENST00000463440 RAD51AP2Q09MP3 1159 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 DCAF4L1Q3SXM0 396 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 ATF7IP2Q5U623 682 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 TMEM173Q86WV6 379 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-202ENST00000463440 VPS52Q8N1B4 723 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 ZFP42Q96MM3 310 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms