RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 GLG1Q92896 1179 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 ALS2CR12Q96Q35 445 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 RHOXF2Q9BQY4 288 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 GOLPH3Q9H4A6 298 aa13.9□□□□□ -0.18
VAPB-203ENST00000463370 CCL15-CCL14A0A0B4J2E2 113 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 COPB2P35606 906 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 NLRP11P59045 1033 aaKnown RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 CCL15Q16663 113 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 FAM160B1Q5W0V3 765 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 LMBRD2Q68DH5 695 aaPredicted RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 CREG2Q8IUH2 290 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 RNF10Q8N5U6 811 aaKnown RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 U2AF1L4Q8WU68 220 aaKnown RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 TRAPPC12Q8WVT3 735 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 SPATA33Q96N06 139 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 NRBP2Q9NSY0 501 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 PACSIN2Q9UNF0 486 aaPredicted RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 GRID2IPA4D2P6 1211 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 TMCO5BA8MYB1 307 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 P4HA2O15460 535 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 MAFO75444 373 aaPredicted RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 NAMPTP43490 491 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 ACOT2P49753 483 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 LIG4P49917 911 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 LRRC71Q8N4P6 559 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 GPRC5AQ8NFJ5 357 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 MORC4Q8TE76 937 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 SLC20A1Q8WUM9 679 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 KREMEN1Q96MU8 473 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 OSBPL9Q96SU4 736 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 CCDC94Q9BW85 323 aaPredicted RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 TARS2Q9BW92 718 aaKnown RBP13.89□□□□□ -0.19
VAPB-203ENST00000463370 AZI2Q9H6S1 392 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 TAS2R14Q9NYV8 317 aa13.89□□□□□ -0.19
VAPB-203ENST00000463370 NOP56O00567 594 aaKnown RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 N4BP1O75113 896 aaKnown RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 GARTP22102 1010 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 ADORA2AP29274 412 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 DNA2P51530 1060 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 BMS1Q14692 1282 aaKnown RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 PTPROQ16827 1216 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 SV2AQ7L0J3 742 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 DHX37Q8IY37 1157 aaKnown RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 DEPTORQ8TB45 409 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 PRPF31Q8WWY3 499 aaKnown RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 ZNF516Q92618 1163 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 LUC7LQ9NQ29 371 aaKnown RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 PCDHGC5Q9Y5F6 944 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 K7ERI5 159 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 LGR5O75473 907 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 GJB1P08034 283 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 RFC5P40937 340 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 CETN1Q12798 172 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 PLCB4Q15147 1175 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 SEZ6Q53EL9 994 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 KRT39Q6A163 491 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 CRELD2Q6UXH1 353 aaPredicted RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 SHCBP1Q8NEM2 672 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 ZNF668Q96K58 619 aaPredicted RBP13.88□□□□□ -0.19
VAPB-203ENST00000463370 PTPN18Q99952 460 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 PI4K2AQ9BTU6 479 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 SUGCTQ9HAC7 445 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 TMEM8AQ9HCN3 771 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 ANKFY1Q9P2R3 1169 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 PNMA3Q9UL41 463 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 SCN4AP35499 1836 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 PTPRJQ12913 1337 aa13.88□□□□□ -0.19
VAPB-203ENST00000463370 PMM2O15305 246 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 GRIN3BO60391 1043 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 CETPP11597 493 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 STRN3Q13033 797 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 KIF22Q14807 665 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 ZNF792Q3KQV3 632 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 PPM1KQ8N3J5 372 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 MPHOSPH6Q99547 160 aaKnown RBP13.87□□□□□ -0.19
VAPB-203ENST00000463370 RRAGCQ9HB90 399 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 COQ4Q9Y3A0 265 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 STYXL1Q9Y6J8 313 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 GALCP54803 685 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 C10orf76Q5T2E6 689 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 SCARA3Q6AZY7 606 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 TAPT1Q6NXT6 567 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 ILDR2Q71H61 639 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 MSANTD4Q8NCY6 345 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 CAGE1Q8TC20 777 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 HELQQ8TDG4 1101 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 ATP8B4Q8TF62 1192 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 PSPC1Q8WXF1 523 aaKnown RBP13.87□□□□□ -0.19
VAPB-203ENST00000463370 MS4A14Q96JA4 679 aa13.87□□□□□ -0.19
VAPB-203ENST00000463370 GBA2Q9HCG7 927 aaPredicted RBP13.87□□□□□ -0.19
VAPB-203ENST00000463370 AGO2Q9UKV8 859 aaKnown RBP13.87□□□□□ -0.19
VAPB-203ENST00000463370 ZNF233A6NK53 670 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms