RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 KCMF1Q9P0J7 381 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 TCEAL9Q9UHQ7 104 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 RASSF10A6NK89 507 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 M0R2C6 588 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 PRPF3O43395 683 aaKnown RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 TPD52L2O43399 206 aaKnown RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 PRC1O43663 620 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 LAG3P18627 525 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 IGFALSP35858 605 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 AVPR1BP47901 424 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 FNTBP49356 437 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 NEK2P51955 445 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 NPEPPSP55786 919 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 ERCC6LQ2NKX8 1250 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 CFAP100Q494V2 611 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 MAP9Q49MG5 647 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 RNF219Q5W0B1 726 aaPredicted RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 IQSEC1Q6DN90 963 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 CC2D1AQ6P1N0 951 aaPredicted RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 NECAB2Q7Z6G3 386 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 CLEC14AQ86T13 490 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 CMTM4Q8IZR5 234 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 NXPE1Q8N323 547 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 CISD2Q8N5K1 135 aaKnown RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 MB21D1Q8N884 522 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 SUPT20HQ8NEM7 779 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 NTN5Q8WTR8 489 aaPredicted RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 NKD2Q969F2 451 aaPredicted RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 WDR92Q96MX6 357 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 SMAD5Q99717 465 aaKnown RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 C14orf93Q9H972 538 aaKnown RBP5.5□□□□□ -1.53
USH2A-203ENST00000463147 SYNPO2Q9UMS6 1093 aa5.5□□□□□ -1.53
USH2A-203ENST00000463147 TNKSO95271 1327 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 ZNF891A8MT65 544 aaPredicted RBP5.49□□□□□ -1.53
USH2A-203ENST00000463147 GRXCR1A8MXD5 290 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 GABRDO14764 452 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 MTSS1O43312 755 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 TOX4O94842 621 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 TMPRSS15P98073 1019 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 ITKQ08881 620 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 SPIDRQ14159 915 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 CATSPEREQ5SY80 951 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 PIK3R6Q5UE93 754 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 CPT1CQ8TCG5 803 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 ERCC4Q92889 916 aaPredicted RBP5.49□□□□□ -1.53
USH2A-203ENST00000463147 PGBD4Q96DM1 585 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 MTMR8Q96EF0 704 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 SLC39A13Q96H72 371 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 MAGEB10Q96LZ2 347 aaPredicted RBP5.49□□□□□ -1.53
USH2A-203ENST00000463147 GEMIN8Q9NWZ8 242 aaKnown RBP5.49□□□□□ -1.53
USH2A-203ENST00000463147 ZIM2Q9NZV7 527 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 TRHDEQ9UKU6 1024 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 SORCS3Q9UPU3 1222 aa5.49□□□□□ -1.53
USH2A-203ENST00000463147 GLRX3O76003 335 aaKnown RBP5.48□□□□□ -1.53
USH2A-203ENST00000463147 GNALP38405 381 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 ACAP1Q15027 740 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 C1QL3Q5VWW1 255 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 ZCCHC8Q6NZY4 707 aaKnown RBP5.48□□□□□ -1.53
USH2A-203ENST00000463147 BMP8AQ7Z5Y6 402 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 RTN4RL1Q86UN2 441 aaPredicted RBP5.48□□□□□ -1.53
USH2A-203ENST00000463147 CNTD1Q8N815 330 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 FOXRED1Q96CU9 486 aaPredicted RBP5.48□□□□□ -1.53
USH2A-203ENST00000463147 HOOK2Q96ED9 719 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 MYEOVQ96EZ4 313 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 DYDC2Q96IM9 177 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 ORAI3Q9BRQ5 295 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 VTA1Q9NP79 307 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 CHST12Q9NRB3 414 aa5.48□□□□□ -1.53
USH2A-203ENST00000463147 POLR3BQ9NW08 1133 aaPredicted RBP5.48□□□□□ -1.53
USH2A-203ENST00000463147 PLEKHD1A6NEE1 506 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 KIAA0355O15063 1070 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 PRKD3O94806 890 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 PRLP01236 227 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 ZNF37AP17032 561 aaPredicted RBP5.47□□□□□ -1.53
USH2A-203ENST00000463147 NR4A1P22736 598 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 ADCYAP1R1P41586 468 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 BCAR1P56945 870 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 RHBDL3P58872 404 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 MAN2A1Q16706 1144 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 ARHGAP44Q17R89 818 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 RD3Q7Z3Z2 195 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 SPATS2Q86XZ4 545 aaKnown RBP5.47□□□□□ -1.53
USH2A-203ENST00000463147 CBARPQ8N350 705 aaPredicted RBP5.47□□□□□ -1.53
USH2A-203ENST00000463147 C2orf69Q8N8R5 385 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 TTC8Q8TAM2 541 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 RPGRQ92834 1020 aaKnown RBP5.47□□□□□ -1.53
USH2A-203ENST00000463147 MAML3Q96JK9 1138 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 SLC46A2Q9BY10 475 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 SYNPO2LQ9H987 977 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 SAMD15Q9P1V8 674 aa5.47□□□□□ -1.53
USH2A-203ENST00000463147 KRTAP29-1A8MX34 341 aaPredicted RBP5.46□□□□□ -1.54
USH2A-203ENST00000463147 CBX4O00257 560 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 NRP1O14786 923 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 BRINP1O60477 761 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 SCAF4O95104 1147 aaKnown RBP5.46□□□□□ -1.54
USH2A-203ENST00000463147 ERBB2P04626 1255 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 CPEP16870 476 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 ITGB6P18564 788 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms