RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 CPA4Q9UI42 421 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 PCDHGB2Q9Y5G2 931 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 A0A087WV62 115 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 A0A1W2PPL8 197 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 FAM171A2A8MVW0 826 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 AKR1B10O60218 316 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 CUTAO60888 179 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 IGHA1P01876 353 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 SYN1P17600 705 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 GLRBP48167 497 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 ANTXR2P58335 489 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 FOXD4Q12950 439 aaPredicted RBP4.63□□□□□ -1.67
GPNMB-205ENST00000463011 PLS1Q14651 629 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 RAB3GAP1Q15042 981 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 CCDC178Q5BJE1 867 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 VASNQ6EMK4 673 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 CIAPIN1Q6FI81 312 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 HIBCHQ6NVY1 386 aaPredicted RBP4.63□□□□□ -1.67
GPNMB-205ENST00000463011 GGT6Q6P531 493 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 FAM180AQ6UWF9 173 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 GPR155Q7Z3F1 870 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 TMC6Q7Z403 805 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 HEATR3Q7Z4Q2 680 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 SAPCD2Q86UD0 394 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 SLC51AQ86UW1 340 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 FAM129CQ86XR2 697 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 MIB1Q86YT6 1006 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 WFDC3Q8IUB2 231 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 FAM26EQ8N5C1 309 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 CCDC33Q8N5R6 958 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 TEX19Q8NA77 164 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 ZSCAN18Q8TBC5 510 aaPredicted RBP4.63□□□□□ -1.67
GPNMB-205ENST00000463011 MYLIPQ8WY64 445 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 ANKS1AQ92625 1134 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 TRIM63Q969Q1 353 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 DDX11Q96FC9 970 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 TSPAN17Q96FV3 270 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 OR10A5Q9H207 317 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 ZNF287Q9HBT7 754 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 TDP1Q9NUW8 608 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 C19orf73Q9NVV2 129 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 SAGE1Q9NXZ1 904 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 HSPBP1Q9NZL4 362 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.63□□□□□ -1.67
GPNMB-205ENST00000463011 ABCF2Q9UG63 623 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.63□□□□□ -1.67
GPNMB-205ENST00000463011 OGDHLQ9ULD0 1010 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 WASF3Q9UPY6 502 aa4.63□□□□□ -1.67
GPNMB-205ENST00000463011 A0A0A6YYK5 440 aaPredicted RBP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 FRS3O43559 492 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 TLR5O60602 858 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 SEC24DO94855 1032 aaPredicted RBP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 MPOP05164 745 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 BRAFP15056 766 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 RPL17P18621 184 aaKnown RBP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 CTSSP25774 331 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 SLC7A1P30825 629 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 TECP42680 631 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 GRK6P43250 576 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 CCT5P48643 541 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 IL13RA1P78552 427 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 CD83Q01151 205 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 FMO1Q01740 532 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 NR1I3Q14994 352 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 SKIDA1Q1XH10 827 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 CR1LQ2VPA4 569 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 CCDC38Q502W7 563 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 PHF19Q5T6S3 580 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 CD300LDQ6UXZ3 194 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 RPTNQ6XPR3 784 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 ETV3LQ6ZN32 361 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 MMS22LQ6ZRQ5 1243 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 BMP8AQ7Z5Y6 402 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 RSPH3Q86UC2 560 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 LILRA2Q8N149 483 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 CLASRPQ8N2M8 674 aaKnown RBP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 ARL8AQ96BM9 186 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 MTFMTQ96DP5 389 aaKnown RBP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 PTPN18Q99952 460 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 SENP7Q9BQF6 1050 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 SOX7Q9BT81 388 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 AS3MTQ9HBK9 375 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 PNPOQ9NVS9 261 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 MAP3K20Q9NYL2 800 aaKnown RBP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 DNAI1Q9UI46 699 aa4.62□□□□□ -1.67
GPNMB-205ENST00000463011 FBXO9Q9UK97 447 aaPredicted RBP4.62□□□□□ -1.67
GPNMB-205ENST00000463011 F8W8V4 182 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 DDX3XO00571 662 aaKnown RBP eCLIP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SGTAO43765 313 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 ADAM23O75077 832 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 TMEM127O75204 238 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 FGF18O76093 207 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 TYRP14679 529 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 RAC2P15153 192 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 TSHRP16473 764 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 GDNFP39905 211 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SLC6A9P48067 706 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SUMO3P55854 103 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms