RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MACROD2A1Z1Q3 448 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 LRRIQ4A6NIV6 560 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 RBAK-RBAKDNI3L0D1 243 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 ABCD1P33897 745 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 GCLMP48507 274 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 PPP3CAQ08209 521 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 ACVR2BQ13705 512 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 SNRNP35Q16560 246 aaKnown RBP15.73■□□□□ 0.11
HDAC6-213ENST00000462730 CYP4F22Q6NT55 531 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 MSL3Q8N5Y2 521 aaKnown RBP15.73■□□□□ 0.11
HDAC6-213ENST00000462730 DEPTORQ8TB45 409 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 ATP8B4Q8TF62 1192 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 POMGNT1Q8WZA1 660 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 EMID1Q96A84 441 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-213ENST00000462730 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.73■□□□□ 0.11
HDAC6-213ENST00000462730 TULP1O00294 542 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-213ENST00000462730 NAMPTP43490 491 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 TM4SF4P48230 202 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 PLCB4Q15147 1175 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 TXLNBQ8N3L3 684 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 PPTC7Q8NI37 304 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 UBXN4Q92575 508 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 SECISBP2LQ93073 1101 aaKnown RBP15.72■□□□□ 0.11
HDAC6-213ENST00000462730 SMARCAD1Q9H4L7 1026 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 DNAJC12Q9UKB3 198 aa15.72■□□□□ 0.11
HDAC6-213ENST00000462730 PCNTO95613 3336 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 SIP14410 1827 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 TOMM70O94826 608 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 SMPD1P17405 629 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 STAT1P42224 750 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 SLC26A2P50443 739 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 CETN1Q12798 172 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 STRN3Q13033 797 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 BRDTQ58F21 947 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-213ENST00000462730 ST7Q9NRC1 585 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 FLRT1Q9NZU1 646 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 APEX2Q9UBZ4 518 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 TRPC6Q9Y210 931 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 BZW2Q9Y6E2 419 aaKnown RBP15.71■□□□□ 0.11
HDAC6-213ENST00000462730 MGAMO43451 1857 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 ZSWIM8A7E2V4 1837 aa15.71■□□□□ 0.11
HDAC6-213ENST00000462730 ZBTB42B2RXF5 422 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 P4HA2O15460 535 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 PJA2O43164 708 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 ADCY6O43306 1168 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 MAFO75444 373 aaPredicted RBP15.71■□□□□ 0.1
HDAC6-213ENST00000462730 TADA3O75528 432 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 LGALS2P05162 132 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 HOXC6P09630 235 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 PNMA6AP0CW24 399 aaPredicted RBP15.71■□□□□ 0.1
HDAC6-213ENST00000462730 FERP16591 822 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 GARTP22102 1010 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 LIG4P49917 911 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 MXI1P50539 228 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 PTK2Q05397 1052 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 SLC18A3Q16572 532 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 DUSP28Q4G0W2 176 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 ZNF571Q7Z3V5 609 aaPredicted RBP15.71■□□□□ 0.1
HDAC6-213ENST00000462730 LMO3Q8TAP4 145 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 AFG1LQ8WV93 481 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 USP6NLQ92738 828 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 STK33Q9BYT3 514 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 LUC7LQ9NQ29 371 aaKnown RBP15.71■□□□□ 0.1
HDAC6-213ENST00000462730 ARGLU1Q9NWB6 273 aaPredicted RBP15.71■□□□□ 0.1
HDAC6-213ENST00000462730 CDC23Q9UJX2 597 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 PPME1Q9Y570 386 aa15.71■□□□□ 0.1
HDAC6-213ENST00000462730 A0A087X0T9 212 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 EFCAB8A8MWE9 144 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 F8VZ95 297 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 TNPO2O14787 897 aaKnown RBP15.7■□□□□ 0.1
HDAC6-213ENST00000462730 CA12O43570 354 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 GFPT2O94808 682 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 FAM228BP0C875 321 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 PRKCIP41743 596 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 TUBB2AQ13885 445 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 DRAP1Q14919 205 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-213ENST00000462730 EPC2Q52LR7 807 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 GPD1LQ8N335 351 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 SOCS4Q8WXH5 440 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 CCDC127Q96BQ5 260 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 FBXL18Q96ME1 805 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 TUBB2BQ9BVA1 445 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 TMEM117Q9H0C3 514 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 ERAP1Q9NZ08 941 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 DAAM1Q9Y4D1 1078 aa15.7■□□□□ 0.1
HDAC6-213ENST00000462730 ZNF286BP0CG31 522 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 CYP2B6P20813 491 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 SCP2P22307 547 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 CTGFP29279 349 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 SOX5P35711 763 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 CYP24A1Q07973 514 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 DRP2Q13474 957 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 CAPSQ13938 189 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 CCL14Q16627 93 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 MFSD14AQ96MC6 490 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 APBA2Q99767 749 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 ADAMTS1Q9UHI8 967 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 USP20Q9Y2K6 914 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 LRRIQ3A6PVS8 624 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms