RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ARHGAP28Q9P2N2 729 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 TFIP11Q9UBB9 837 aaKnown RBP20.77■□□□□ 0.92
COL9A3-203ENST00000462700 CCDC39Q9UFE4 941 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 USP20Q9Y2K6 914 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 NPHP3-ACAD11A0A0J9YXS1 232 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 K7ERI5 159 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 SPTLC2O15270 562 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 YEATS4O95619 227 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 PLS3P13797 630 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 PPM1AP35813 382 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 TXLNAP40222 546 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 AFF1P51825 1210 aaKnown RBP20.76■□□□□ 0.91
COL9A3-203ENST00000462700 BCAR1P56945 870 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 PLCB3Q01970 1234 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 CACNB1Q02641 598 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-203ENST00000462700 DHX8Q14562 1220 aaKnown RBP20.76■□□□□ 0.91
COL9A3-203ENST00000462700 TMEM132AQ24JP5 1023 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 HACE1Q8IYU2 909 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 ATXN2LQ8WWM7 1075 aaKnown RBP20.76■□□□□ 0.91
COL9A3-203ENST00000462700 LARP4BQ92615 738 aaKnown RBP20.76■□□□□ 0.91
COL9A3-203ENST00000462700 APOL6Q9BWW8 343 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 TMEM134Q9H6X4 195 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 NRDE2Q9H7Z3 1164 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 ODF2LQ9ULJ1 636 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 COG5Q9UP83 839 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 RBM19Q9Y4C8 960 aaKnown RBP20.76■□□□□ 0.91
COL9A3-203ENST00000462700 XIRP2A4UGR9 3374 aa20.76■□□□□ 0.91
COL9A3-203ENST00000462700 INPPL1O15357 1258 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 ZC3H11AO75152 810 aaKnown RBP eCLIP20.75■□□□□ 0.914e-8■■□□□ 14.3
COL9A3-203ENST00000462700 PPP6R2O75170 966 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 IRS1P35568 1242 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 DDIT3P35638 169 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 MLH1P40692 756 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 RNASELQ05823 741 aaKnown RBP20.75■□□□□ 0.91
COL9A3-203ENST00000462700 FOXD4L6Q3SYB3 417 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-203ENST00000462700 NT5DC1Q5TFE4 455 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 FOXD4L3Q6VB84 417 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-203ENST00000462700 TAS1R3Q7RTX0 852 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 SLC39A11Q8N1S5 342 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 SPIRE2Q8WWL2 714 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 HLA-CQ95604 372 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 REEP2Q9BRK0 252 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 NTPCRQ9BSD7 190 aaKnown RBP20.75■□□□□ 0.91
COL9A3-203ENST00000462700 SPG21Q9NZD8 308 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 KANSL3Q9P2N6 904 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 STK17AQ9UEE5 414 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 LZTS1Q9Y250 596 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 GIT1Q9Y2X7 761 aa20.75■□□□□ 0.91
COL9A3-203ENST00000462700 MYH15Q9Y2K3 1946 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 SLC16A4O15374 487 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 POMCP01189 267 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 AKAP5P24588 427 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 ALDH7A1P49419 539 aaKnown RBP20.74■□□□□ 0.91
COL9A3-203ENST00000462700 ATF7IP2Q5U623 682 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 EEF1DP3Q658K8 133 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 ZNF280BQ86YH2 543 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 MRPS27Q92552 414 aaKnown RBP20.74■□□□□ 0.91
COL9A3-203ENST00000462700 GAD1Q99259 594 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 ADPGKQ9BRR6 497 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 GBP3Q9H0R5 595 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 TLR9Q9NR96 1032 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 KCNG1Q9UIX4 513 aa20.74■□□□□ 0.91
COL9A3-203ENST00000462700 PLXNA4Q9HCM2 1894 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 CARNS1A5YM72 827 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 ARL5CA6NH57 179 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 NT5C1B-RDH14C9J2C7 533 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 B4GALT3O60512 393 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 DDHD2O94830 711 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 SMTNP53814 917 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 MRPS5P82675 430 aaKnown RBP20.73■□□□□ 0.91
COL9A3-203ENST00000462700 TFF2Q03403 129 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 RRAGBQ5VZM2 374 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 ZFP42Q96MM3 310 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 LARSQ9P2J5 1176 aaKnown RBP20.73■□□□□ 0.91
COL9A3-203ENST00000462700 DNAJB4Q9UDY4 337 aa20.73■□□□□ 0.91
COL9A3-203ENST00000462700 ZMYM2Q9UBW7 1377 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 KRT18P05783 430 aaKnown RBP20.72■□□□□ 0.91
COL9A3-203ENST00000462700 GALTP07902 379 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 SLC11A1P49279 550 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 SCNN1GP51170 649 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 ERVFC1P60507 584 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 KRT17Q04695 432 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 HYAL1Q12794 435 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 GIT2Q14161 759 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 DCAF4L1Q3SXM0 396 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 ATL3Q6DD88 541 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 TMEM173Q86WV6 379 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-203ENST00000462700 TMEM161BQ8NDZ6 487 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 ASB2Q96Q27 587 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 ACO2Q99798 780 aaKnown RBP20.72■□□□□ 0.91
COL9A3-203ENST00000462700 MRPL4Q9BYD3 311 aaKnown RBP20.72■□□□□ 0.91
COL9A3-203ENST00000462700 UBE2ZQ9H832 354 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-203ENST00000462700 MIOSQ9NXC5 875 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 DAXXQ9UER7 740 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-203ENST00000462700 PARP2Q9UGN5 583 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 PUF60Q9UHX1 559 aaKnown RBP20.72■□□□□ 0.91
COL9A3-203ENST00000462700 TNFSF13BQ9Y275 285 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 PCDHGC5Q9Y5F6 944 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 ATG2AQ2TAZ0 1938 aa20.72■□□□□ 0.91
COL9A3-203ENST00000462700 A0A087X0B3 334 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms