RNA–Protein interactions for RNA: ENST00000460808.5

TGFA-208, Transcript of transforming growth factor alpha, humanhuman

TSL 4

Gene TGFA, Length 470 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-208ENST00000460808 CLIC4Q9Y696 253 aa13.18□□□□□ -0.3
TGFA-208ENST00000460808 VPS37CA5D8V6 355 aaPredicted RBP13.17□□□□□ -0.3
TGFA-208ENST00000460808 ARL5CA6NH57 179 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 ABLIM1O14639 778 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 LINC01565O15544 149 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 NCK2O43639 380 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 KCNA5P22460 613 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 NPTX2P47972 431 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 NT5DC1Q5TFE4 455 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
TGFA-208ENST00000460808 TMEM184AQ6ZMB5 413 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 CDR2LQ86X02 465 aaPredicted RBP13.17□□□□□ -0.3
TGFA-208ENST00000460808 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
TGFA-208ENST00000460808 EFHBQ8N7U6 833 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 IGSF21Q96ID5 467 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 CCSER1Q9C0I3 900 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
TGFA-208ENST00000460808 C17orf75Q9HAS0 396 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 PTPRHQ9HD43 1115 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 CLEC1BQ9P126 229 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 IRAK3Q9Y616 596 aa13.17□□□□□ -0.3
TGFA-208ENST00000460808 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
TGFA-208ENST00000460808 GRXCR2A6NFK2 248 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 STX6O43752 255 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 HIP1RO75146 1068 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 LONP1P36776 959 aaKnown RBP13.16□□□□□ -0.3
TGFA-208ENST00000460808 SLC11A1P49279 550 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 EFNA5P52803 228 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 NAB2Q15742 525 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 DUSP6Q16828 381 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 EEF1DP3Q658K8 133 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 CABP7Q86V35 215 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 ZBTB8OSQ8IWT0 167 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 ZFP42Q96MM3 310 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
TGFA-208ENST00000460808 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 GAD1Q99259 594 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 TMEM175Q9BSA9 504 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 CXCL16Q9H2A7 254 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 UBN1Q9NPG3 1134 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 MARCH5Q9NX47 278 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 KCND2Q9NZV8 630 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
TGFA-208ENST00000460808 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 GIT1Q9Y2X7 761 aa13.16□□□□□ -0.3
TGFA-208ENST00000460808 NT5C1B-RDH14C9J2C7 533 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 H3BQ06 376 aaPredicted RBP13.15□□□□□ -0.3
TGFA-208ENST00000460808 LILRB3O75022 631 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
TGFA-208ENST00000460808 PRKCBP05771 671 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 ITGA4P13612 1032 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 PROZP22891 400 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 MLH1P40692 756 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
TGFA-208ENST00000460808 ALDH7A1P49419 539 aaKnown RBP13.15□□□□□ -0.3
TGFA-208ENST00000460808 ZNF131P52739 623 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 MAPK6Q16659 721 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 SPOUT1Q5T280 376 aaKnown RBP13.15□□□□□ -0.3
TGFA-208ENST00000460808 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
TGFA-208ENST00000460808 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.3
TGFA-208ENST00000460808 SPIRE2Q8WWL2 714 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 FIZ1Q96SL8 496 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 ZBP1Q9H171 429 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 CD320Q9NPF0 282 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 CLDND1Q9NY35 253 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
TGFA-208ENST00000460808 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
TGFA-208ENST00000460808 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 CITO14578 2027 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 CARNS1A5YM72 827 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 PTGESO14684 152 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 NPTXRO95502 500 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 BRD1O95696 1058 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 POMCP01189 267 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 IL9P15248 144 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 PLCG1P19174 1290 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 NRIP1P48552 1158 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 PEX3P56589 373 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
TGFA-208ENST00000460808 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
TGFA-208ENST00000460808 PRPF4BQ13523 1007 aaKnown RBP13.14□□□□□ -0.31
TGFA-208ENST00000460808 SLC39A14Q15043 492 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 FAM178BQ8IXR5 827 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
TGFA-208ENST00000460808 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms