RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 RASA4BC9J798 803 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 H7C0C1 242 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 RASA4O43374 803 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 SYF2O95926 243 aaKnown RBP12.89□□□□□ -0.35
CPNE6-202ENST00000460657 SCP2P22307 547 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 MSH2P43246 934 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 ATP5OP48047 213 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 DYNLT1P63172 113 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 NR1H3Q13133 447 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 TFDP1Q14186 410 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 FBXW10Q5XX13 1052 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 CASC4Q6P4E1 433 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 FOXR2Q6PJQ5 311 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 PITPNM3Q9BZ71 974 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 RNF146Q9NTX7 359 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 GINS2Q9Y248 185 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 PCDHGC5Q9Y5F6 944 aa12.89□□□□□ -0.35
CPNE6-202ENST00000460657 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 ZSCAN5CA6NGD5 496 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 SLC1A1P43005 524 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 SURF1Q15526 300 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 SNRNP35Q16560 246 aaKnown RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 CIAPIN1Q6FI81 312 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 TRMT10CQ7L0Y3 403 aaKnown RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 NSUN6Q8TEA1 469 aaKnown RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 F8VZ95 297 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 MCF2LO15068 1137 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 MED7O43513 233 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 CHN1P15882 459 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 TMEM35BQ8NCS4 154 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 CCDC110Q8TBZ0 833 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 HAS1Q92839 578 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 GDF3Q9NR23 364 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 FOXN3O00409 490 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 TBXAS1P24557 533 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 KCNMA1Q12791 1236 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 MYCBPAPQ8TBZ2 947 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-202ENST00000460657 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
CPNE6-202ENST00000460657 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 SARNPP82979 210 aaKnown RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 SPARCL1Q14515 664 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 NCAPG2Q86XI2 1143 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 ATP2A3Q93084 1043 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 SEC16BQ96JE7 1060 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 TTC25Q96NG3 672 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 INO80BQ9C086 356 aaPredicted RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 LCMT1Q9UIC8 334 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 PHF20L1A8MW92 1017 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 TLR3O15455 904 aaKnown RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 CALB1P05937 261 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 FDX1P10109 184 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 MAPK7Q13164 816 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 ATL2Q8NHH9 583 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 FAM151AQ8WW52 585 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 CSADQ9Y600 493 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 CLDN3O15551 220 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 GNA15P30679 374 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 CCDC38Q502W7 563 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 EPM2AIP1Q7L775 607 aaPredicted RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 ZNF720Q7Z2F6 126 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 PYROXD1Q8WU10 500 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 RILPQ96NA2 401 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 UNC45AQ9H3U1 944 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 RPSAP08865 295 aaKnown RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 MYBL2P10244 700 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 ITIH2P19823 946 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 YARSP54577 528 aaKnown RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 SLC12A3P55017 1021 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 LRRC14Q15048 493 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 PABPC3Q9H361 631 aaKnown RBP12.87□□□□□ -0.35
CPNE6-202ENST00000460657 OSGEPQ9NPF4 335 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 HESX1Q9UBX0 185 aa12.87□□□□□ -0.35
CPNE6-202ENST00000460657 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
CPNE6-202ENST00000460657 TNFRSF8P28908 595 aa12.86□□□□□ -0.35
CPNE6-202ENST00000460657 BASP1P80723 227 aaKnown RBP12.86□□□□□ -0.35
CPNE6-202ENST00000460657 EXOC8Q8IYI6 725 aa12.86□□□□□ -0.35
CPNE6-202ENST00000460657 TSEN2Q8NCE0 465 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms