RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 CHRNA1P02708 482 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 PRKCBP05771 671 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 RAG1P15918 1043 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 NMT1P30419 496 aaKnown RBP8.33□□□□□ -1.08
ABCA4-202ENST00000460514 AXLP30530 894 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 MGAT3Q09327 533 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 STK4Q13043 487 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 PAK2Q13177 524 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 PRPF4BQ13523 1007 aaKnown RBP8.33□□□□□ -1.08
ABCA4-202ENST00000460514 FAM187BQ17R55 369 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 BMT2Q1RMZ1 405 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 ZSCAN23Q3MJ62 389 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 ZNF618Q5T7W0 954 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 TSHZ1Q6ZSZ6 1077 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 HS2ST1Q7LGA3 356 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 CATSPER4Q7RTX7 472 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 GUF1Q8N442 669 aaKnown RBP8.33□□□□□ -1.08
ABCA4-202ENST00000460514 ZNF507Q8TCN5 953 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 ZDHHC16Q969W1 377 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 CCDC51Q96ER9 411 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-202ENST00000460514 FIZ1Q96SL8 496 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 PPP1R16BQ96T49 567 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 EPAS1Q99814 870 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 TSG101Q99816 390 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 MRPL4Q9BYD3 311 aaKnown RBP8.33□□□□□ -1.08
ABCA4-202ENST00000460514 IFT122Q9HBG6 1241 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 PRDM5Q9NQX1 630 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-202ENST00000460514 TBX20Q9UMR3 447 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 NR2E3Q9Y5X4 410 aa8.33□□□□□ -1.08
ABCA4-202ENST00000460514 BICDL2A1A5D9 508 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 SYCE3A1L190 88 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 HNRNPDLO14979 420 aaKnown RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 N4BP3O15049 544 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 KIAA0391O15091 583 aaKnown RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 CALUO43852 315 aaPredicted RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 TIMP1P01033 207 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 PFKMP08237 780 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 IQCF3P0C7M6 154 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 MYBP10242 640 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 LIG4P49917 911 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 MBTD1Q05BQ5 628 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 TYRO3Q06418 890 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 FBXO47Q5MNV8 452 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 ISM2Q6H9L7 571 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 SLFN12LQ6IEE8 588 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 NOTUMQ6P988 496 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 ZPBP2Q6X784 338 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 EPM2AIP1Q7L775 607 aaPredicted RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 MAP4K3Q8IVH8 894 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 RPUSD2Q8IZ73 545 aaKnown RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 TMEM199Q8N511 208 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 KIAA0895Q8NCT3 520 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 SCFD1Q8WVM8 642 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 SEPT8Q92599 483 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 DPF3Q92784 378 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 APBB2Q92870 758 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 WNT8BQ93098 351 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 HPS3Q969F9 1004 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 ZNF668Q96K58 619 aaPredicted RBP8.32□□□□□ -1.08
ABCA4-202ENST00000460514 ADPGKQ9BRR6 497 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 STRA6Q9BX79 667 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 FTHL17Q9BXU8 183 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 PPP1R12CQ9BZL4 782 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 CCDC113Q9H0I3 377 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 GBP3Q9H0R5 595 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 FZD8Q9H461 694 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 CHST12Q9NRB3 414 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 GDAQ9Y2T3 454 aa8.32□□□□□ -1.08
ABCA4-202ENST00000460514 ADGRA3Q8IWK6 1321 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 CNTNAP2Q9UHC6 1331 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 PDXKO00764 312 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 TOM1L1O75674 476 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 PRPF6O94906 941 aaKnown RBP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 FGFR1OPO95684 399 aaKnown RBP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 PIGRP01833 764 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 GHRP10912 638 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 SKIP12755 728 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 RPL13P26373 211 aaKnown RBP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 CYP2C18P33260 490 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 PRCPP42785 496 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 MATR3P43243 847 aaKnown RBP eCLIP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 CASP5P51878 434 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 LRRC63Q05C16 580 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 NFX1Q12986 1120 aaKnown RBP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 PAK1Q13153 545 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 LPIN1Q14693 890 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 KYAT1Q16773 422 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 DCAF4L1Q3SXM0 396 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 ZC2HC1CQ53FD0 456 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-202ENST00000460514 ATF7IP2Q5U623 682 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 MFSD5Q6N075 450 aa8.31□□□□□ -1.08
ABCA4-202ENST00000460514 FOXR2Q6PJQ5 311 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms