RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 UBXN11Q5T124 520 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 FOXD4L5Q5VV16 416 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 SLC27A1Q6PCB7 646 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 APBB1IPQ7Z5R6 666 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 THNSL1Q8IYQ7 743 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 KRI1Q8N9T8 703 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 KLHL23Q8NBE8 558 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 COLGALT1Q8NBJ5 622 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 FOXD4L4Q8WXT5 416 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 LPPQ93052 612 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 PABPC5Q96DU9 382 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 ZNF558Q96NG5 402 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 ADPGKQ9BRR6 497 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 RSAD1Q9HA92 442 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 POLD4Q9HCU8 107 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 KANSL3Q9P2N6 904 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 PUF60Q9UHX1 559 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 FBXO2Q9UK22 296 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 RALGAPA2Q2PPJ7 1873 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 ACKR2O00590 384 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 N4BP3O15049 544 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 GRM6O15303 877 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 OFD1O75665 1012 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 F13A1P00488 732 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 PRKCBP05771 671 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 PLCG1P19174 1290 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 ALDH7A1P49419 539 aaKnown RBP16.47■□□□□ 0.23
ATG4B-213ENST00000460211 SMTNP53814 917 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 KRT17Q04695 432 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 UBE3AQ05086 875 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 KARSQ15046 597 aaKnown RBP16.47■□□□□ 0.23
ATG4B-213ENST00000460211 CLUL1Q15846 466 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 ATL3Q6DD88 541 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 PPP2R3CQ969Q6 453 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
ATG4B-213ENST00000460211 CWH43Q9H720 699 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 ALG13Q9NP73 1137 aaKnown RBP16.47■□□□□ 0.23
ATG4B-213ENST00000460211 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 INPP5FQ9Y2H2 1132 aa16.47■□□□□ 0.23
ATG4B-213ENST00000460211 C5orf42Q9H799 3197 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 MYO7AQ13402 2215 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 SPTLC2O15270 562 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 B4GALT5O43286 388 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 YEATS4O95619 227 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 ITGB1P05556 798 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 KRT18P05783 430 aaKnown RBP16.46■□□□□ 0.23
ATG4B-213ENST00000460211 NPTX2P47972 431 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 ZP2Q05996 745 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
ATG4B-213ENST00000460211 KCNT2Q6UVM3 1135 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 LRRC55Q6ZSA7 311 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 LINC00301Q8NCQ3 95 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 RAD54LQ92698 747 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 EPSTI1Q96J88 318 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 CLIC6Q96NY7 704 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 FAM193BQ96PV7 902 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-213ENST00000460211 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
ATG4B-213ENST00000460211 TMEM134Q9H6X4 195 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 SPG21Q9NZD8 308 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 LARSQ9P2J5 1176 aaKnown RBP16.46■□□□□ 0.23
ATG4B-213ENST00000460211 TFIP11Q9UBB9 837 aaKnown RBP16.46■□□□□ 0.23
ATG4B-213ENST00000460211 STK17AQ9UEE5 414 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 CFAP45Q9UL16 551 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 IPPQ9Y573 584 aa16.46■□□□□ 0.23
ATG4B-213ENST00000460211 PIEZO1Q92508 2521 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 H0YCG3 227 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 NCK2O43639 380 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 PPP6R2O75170 966 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 FGF18O76093 207 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 NPTXRO95502 500 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 PLS3P13797 630 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 DDIT3P35638 169 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 MRE11P49959 708 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 RAD51AP2Q09MP3 1159 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 SPECC1Q5M775 1068 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 RRAGBQ5VZM2 374 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 AGMOQ6ZNB7 445 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 CCDC73Q6ZRK6 1079 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 DAW1Q8N136 415 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 MICAL1Q8TDZ2 1067 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 POF1BQ8WVV4 589 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 SPIRE2Q8WWL2 714 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 KIFC3Q9BVG8 833 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 CCDC113Q9H0I3 377 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 ODF2LQ9ULJ1 636 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 FAM50BQ9Y247 325 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 GIT1Q9Y2X7 761 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 WDFY4Q6ZS81 3184 aa16.45■□□□□ 0.22
ATG4B-213ENST00000460211 SFI1A8K8P3 1242 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 PLCB3Q01970 1234 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 STRN3Q13033 797 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 MAPK7Q13164 816 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 MCM6Q14566 821 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 BMS1Q14692 1282 aaKnown RBP16.44■□□□□ 0.22
ATG4B-213ENST00000460211 PDE12Q6L8Q7 609 aaKnown RBP16.44■□□□□ 0.22
ATG4B-213ENST00000460211 SMG8Q8ND04 991 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms