RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 RBP3P10745 1247 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 PRG2P13727 222 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 LCP1P13796 627 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 ZSCAN20P17040 1043 aaPredicted RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 PTPN1P18031 435 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 TCEA1P23193 301 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 APEX1P27695 318 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 CDC25AP30304 524 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 HOXC12P31275 282 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 EIF4A3P38919 411 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 EPHA5P54756 1037 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 SLC1A5Q15758 541 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 PDCD4Q53EL6 469 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 CEP85LQ5SZL2 805 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 LCE3CQ5T5A8 94 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 ACBD5Q5T8D3 534 aaPredicted RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 PIM3Q86V86 326 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 THNSL2Q86YJ6 484 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 NRACQ8N912 160 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 OR52N2Q8NGI0 321 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 OR5M3Q8NGP4 307 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 RNF31Q96EP0 1072 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 FAM84BQ96KN1 310 aaPredicted RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 HAPLN3Q96S86 360 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 MEIS3Q99687 375 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 AARSD1Q9BTE6 412 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 PRSS22Q9GZN4 317 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 NKX2-4Q9H2Z4 354 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 GSTO2Q9H4Y5 243 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 PHAXQ9H814 394 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 C14orf93Q9H972 538 aaKnown RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 POT1Q9NUX5 634 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 UCKL1Q9NWZ5 548 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 ADAMTS5Q9UNA0 930 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 ATP11BQ9Y2G3 1177 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 CHST2Q9Y4C5 530 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 USP15Q9Y4E8 981 aaPredicted RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 KLF2Q9Y5W3 355 aaPredicted RBP0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 HMCN1Q96RW7 5635 aa0.61□□□□□ -2.31
SNORD42B-201ENST00000458893 USP31Q70CQ4 1352 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 NKRFO15226 690 aaKnown RBP eCLIP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 RTL8CO15255 209 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 SLC28A2O43868 658 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 GREM1O60565 184 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 STC2O76061 302 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 ZNF432O94892 652 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 GARTP22102 1010 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 GRK2P25098 689 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 AOAHP28039 575 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 GRK3P35626 688 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 FOLR3P41439 243 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 GRIA3P42263 894 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 KIR2DL3P43628 341 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 VEGFCP49767 419 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 ADAM8P78325 824 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 RPL36AP83881 106 aaKnown RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 ZXDBP98169 803 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 NFATC4Q14934 902 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 FAM214AQ32MH5 1076 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 CEP78Q5JTW2 689 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 DAB2IPQ5VWQ8 1189 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 KANK2Q63ZY3 851 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 LARP1BQ659C4 914 aaKnown RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 EFCAB12Q6NXP0 572 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 MIS18BP1Q6P0N0 1132 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 SHC4Q6S5L8 630 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 LRSAM1Q6UWE0 723 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 MAMDC2Q7Z304 686 aaPredicted RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 TRIM59Q8IWR1 403 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 MSL3Q8N5Y2 521 aaKnown RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 HIPK4Q8NE63 616 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 PIGOQ8TEQ8 1089 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 ZNF296Q8WUU4 475 aaPredicted RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 VCPIP1Q96JH7 1222 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 CCDC140Q96MF4 163 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 TMEM204Q9BSN7 226 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 TEX101Q9BY14 249 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 CD244Q9BZW8 370 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 REXO4Q9GZR2 422 aaKnown RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 MTFR1LQ9H019 292 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 FOXP1Q9H334 677 aaPredicted RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 KCTD5Q9NXV2 234 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 SELENONQ9NZV5 590 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 USP36Q9P275 1121 aaKnown RBP0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 LRP2BPQ9P2M1 347 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 TELO2Q9Y4R8 837 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 ATP23Q9Y6H3 246 aa0.6□□□□□ -2.31
SNORD42B-201ENST00000458893 MUC19Q7Z5P9 8384 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 GCOM1H8Y6P7 765 aaPredicted RBP0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 PRPF40AO75400 957 aaKnown RBP0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 ABLIM3O94929 683 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 LATS1O95835 1130 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 CFIP05156 583 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 GM2AP17900 193 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 MC4RP32245 332 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 SREBF1P36956 1147 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 ARHGAP25P42331 645 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 GAS1P54826 345 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 RRP1P56182 461 aaKnown RBP0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms