RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CWH43Q9H720 699 aa17.78■□□□□ 0.44
CD28-203ENST00000458610 PARVGQ9HBI0 331 aa17.78■□□□□ 0.44
CD28-203ENST00000458610 FAM13BQ9NYF5 915 aa17.78■□□□□ 0.44
CD28-203ENST00000458610 ARHGAP28Q9P2N2 729 aa17.78■□□□□ 0.44
CD28-203ENST00000458610 PLAGL2Q9UPG8 496 aa17.78■□□□□ 0.44
CD28-203ENST00000458610 GIT1Q9Y2X7 761 aa17.78■□□□□ 0.44
CD28-203ENST00000458610 MYO9BQ13459 2157 aa17.78■□□□□ 0.44
CD28-203ENST00000458610 SLC16A4O15374 487 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 NPTXRO95502 500 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 GIT2Q14161 759 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 CCDC85BQ15834 202 aaPredicted RBP17.77■□□□□ 0.44
CD28-203ENST00000458610 DCAF4L1Q3SXM0 396 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 LONRF3Q496Y0 759 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 TIGD5Q53EQ6 642 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 KCNT2Q6UVM3 1135 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 AGMOQ6ZNB7 445 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 THNSL1Q8IYQ7 743 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 IQUBQ8NA54 791 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 KLHL23Q8NBE8 558 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 COLGALT1Q8NBJ5 622 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 SMG8Q8ND04 991 aaKnown RBP17.77■□□□□ 0.44
CD28-203ENST00000458610 PPP2R3CQ969Q6 453 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 REEP2Q9BRK0 252 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 KIFC3Q9BVG8 833 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 EIF2AQ9BY44 585 aaKnown RBP17.77■□□□□ 0.44
CD28-203ENST00000458610 PANK2Q9BZ23 570 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 CUEDC2Q9H467 287 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 TNFSF13BQ9Y275 285 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 INPP5FQ9Y2H2 1132 aa17.77■□□□□ 0.44
CD28-203ENST00000458610 AMPD3Q01432 767 aa17.76■□□□□ 0.43
CD28-203ENST00000458610 BMS1Q14692 1282 aaKnown RBP17.76■□□□□ 0.43
CD28-203ENST00000458610 ATF7IP2Q5U623 682 aa17.76■□□□□ 0.43
CD28-203ENST00000458610 LRRC55Q6ZSA7 311 aa17.76■□□□□ 0.43
CD28-203ENST00000458610 TCHPQ9BT92 498 aa17.76■□□□□ 0.43
CD28-203ENST00000458610 SCAND2PQ9GZW5 306 aaPredicted RBP17.76■□□□□ 0.43
CD28-203ENST00000458610 ZHX3Q9H4I2 956 aa17.76■□□□□ 0.43
CD28-203ENST00000458610 PDZD7Q9H5P4 517 aa17.76■□□□□ 0.43
CD28-203ENST00000458610 SPG21Q9NZD8 308 aa17.76■□□□□ 0.43
CD28-203ENST00000458610 NPHP3-ACAD11A0A0J9YXS1 232 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 NCK2O43639 380 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 TRAK2O60296 914 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 NR1I2O75469 434 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 FGF18O76093 207 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 ALDH2P05091 517 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 ITGB1P05556 798 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 ZNF131P52739 623 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 PLCB3Q01970 1234 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 SKIV2LQ15477 1246 aaKnown RBP17.75■□□□□ 0.43
CD28-203ENST00000458610 PDE12Q6L8Q7 609 aaKnown RBP17.75■□□□□ 0.43
CD28-203ENST00000458610 SPPL3Q8TCT6 385 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 KCNN1Q92952 543 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 SPATA32Q96LK8 384 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 APOL6Q9BWW8 343 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 ALG13Q9NP73 1137 aaKnown RBP17.75■□□□□ 0.43
CD28-203ENST00000458610 TBC1D13Q9NVG8 400 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 STK39Q9UEW8 545 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 PARP2Q9UGN5 583 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 PCDHA7Q9UN72 937 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 LZTS1Q9Y250 596 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 ZMYM2Q9UBW7 1377 aa17.75■□□□□ 0.43
CD28-203ENST00000458610 GRM6O15303 877 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 INPPL1O15357 1258 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 MAPTP10636 758 aaKnown RBP17.74■□□□□ 0.43
CD28-203ENST00000458610 GAP43P17677 238 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 NCKAP1LP55160 1127 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 CACNB1Q02641 598 aaPredicted RBP17.74■□□□□ 0.43
CD28-203ENST00000458610 AXDND1Q5T1B0 1012 aaPredicted RBP17.74■□□□□ 0.43
CD28-203ENST00000458610 NT5DC1Q5TFE4 455 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 ZPBP2Q6X784 338 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 HAUS6Q7Z4H7 955 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 CDR2LQ86X02 465 aaPredicted RBP17.74■□□□□ 0.43
CD28-203ENST00000458610 FAM178BQ8IXR5 827 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 PDILTQ8N807 584 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 TMEM161BQ8NDZ6 487 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 MICAL1Q8TDZ2 1067 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 DDX12PQ92771 950 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 ACO2Q99798 780 aaKnown RBP17.74■□□□□ 0.43
CD28-203ENST00000458610 TMEM175Q9BSA9 504 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 NSUN3Q9H649 340 aaKnown RBP17.74■□□□□ 0.43
CD28-203ENST00000458610 SEL1LQ9UBV2 794 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 COG5Q9UP83 839 aa17.74■□□□□ 0.43
CD28-203ENST00000458610 ARL5CA6NH57 179 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 MEIS3P2A8K0S8 358 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 BCAR1P56945 870 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 SHC4Q6S5L8 630 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 DYMQ7RTS9 669 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 LRRC15Q8TF66 581 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 POF1BQ8WVV4 589 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 MRPS27Q92552 414 aaKnown RBP17.73■□□□□ 0.43
CD28-203ENST00000458610 TMEM169Q96HH4 297 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 RPS6KC1Q96S38 1066 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 GAD1Q99259 594 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 TARS2Q9BW92 718 aaKnown RBP17.73■□□□□ 0.43
CD28-203ENST00000458610 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 TNMDQ9H2S6 317 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 NXF3Q9H4D5 531 aaKnown RBP17.73■□□□□ 0.43
CD28-203ENST00000458610 MAGEF1Q9HAY2 307 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 HES2Q9Y543 173 aa17.73■□□□□ 0.43
CD28-203ENST00000458610 RALGAPA2Q2PPJ7 1873 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms