RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TMX1Q9H3N1 280 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 CLDND1Q9NY35 253 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 BARHL2Q9NY43 387 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 HCN2Q9UL51 889 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 PADI3Q9ULW8 664 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 PCDHA2Q9Y5H9 948 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 SNX14Q9Y5W7 946 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 CHD9Q3L8U1 2897 aa5.33□□□□□ -1.56
GTF3C3-208ENST00000455546 NFASCO94856 1347 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 IGLV3-22A0A075B6J6 115 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 IGKV6D-21A0A0A0MT36 114 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 IPO5O00410 1097 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 LINC01565O15544 149 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 BNIP3LO60238 219 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 CDC45O75419 566 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 FOSP01100 380 aaPredicted RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 MAPTP10636 758 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 SCG2P13521 617 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 EPB42P16452 691 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 CD33P20138 364 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 DNAJB1P25685 340 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 LTBRP36941 435 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 SREBF1P36956 1147 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 METAP2P50579 478 aaKnown RBP eCLIP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 KRT76Q01546 638 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 CAMK1Q14012 370 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 UBAP2LQ14157 1087 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 PFKFB3Q16875 520 aaPredicted RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 PRR16Q569H4 304 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 FAM102BQ5T8I3 360 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 TSHZ1Q6ZSZ6 1077 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 RBM23Q86U06 439 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 CCDC60Q8IWA6 550 aaPredicted RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 FAM178BQ8IXR5 827 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 CKAP2LQ8IYA6 745 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 TRIM22Q8IYM9 498 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 KIAA0319LQ8IZA0 1049 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 METTL13Q8N6R0 699 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 NEK9Q8TD19 979 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 TMEM40Q8WWA1 233 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 C1QTNF1Q9BXJ1 281 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 NSUN3Q9H649 340 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 NCOA5Q9HCD5 579 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 C11orf16Q9NQ32 467 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 ZNF302Q9NR11 478 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 PLAGL2Q9UPG8 496 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 NOC2LQ9Y3T9 749 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 PCDHB7Q9Y5E2 793 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 PCDHGC5Q9Y5F6 944 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 PCDHGC4Q9Y5F7 938 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 TRPV2Q9Y5S1 764 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 XIRP2A4UGR9 3374 aa5.32□□□□□ -1.56
GTF3C3-208ENST00000455546 ADGRA3Q8IWK6 1321 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 IGSF9BQ9UPX0 1349 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 SMIM35A0A1B0GVV1 85 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ZBTB42B2RXF5 422 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 C5orf67F2Z3F1 127 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 PI4K2BG5E9Z4 385 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 M0QZ92 97 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 PER2O15055 1255 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 EFSO43281 561 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 PRPF3O43395 683 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 HBP1O60381 514 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 MGEA5O60502 916 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 TNFRSF21O75509 655 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 RPS6KA5O75582 802 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 SASH3O75995 380 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 VTNP04004 478 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ITGB1P05556 798 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 RB1P06400 928 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 CYP3A4P08684 503 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 FAM157BP0CG42 384 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 HSPA4P34932 840 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 IRS1P35568 1242 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 RBM10P98175 930 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 HYAL1Q12794 435 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 PAK2Q13177 524 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 AP3B2Q13367 1082 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 KRT32Q14532 448 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 NTRK3Q16288 839 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 KIZQ2M2Z5 673 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 TMEM31Q5JXX7 168 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 SAMD5Q5TGI4 173 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 FAM160B1Q5W0V3 765 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 MIS18BP1Q6P0N0 1132 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 FIGNL1Q6PIW4 674 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 BLOC1S2Q6QNY1 142 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ADGRD2Q7Z7M1 963 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 NME8Q8N427 588 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 KLHL23Q8NBE8 558 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 SPPL3Q8TCT6 385 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 MICAL1Q8TDZ2 1067 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ATP8B4Q8TF62 1192 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 CRYGNQ8WXF5 182 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 KCNB2Q92953 911 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ALKBH8Q96BT7 664 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 PABPC5Q96DU9 382 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 OSMRQ99650 979 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms