RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ADSSP30520 456 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 AXLP30530 894 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 HOXA11P31270 313 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 MYBPC2Q14324 1141 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 UMODL1Q5DID0 1318 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 SPATA1Q5VX52 437 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 SLC9A9Q8IVB4 645 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 OSBPL7Q9BZF2 842 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 AGO3Q9H9G7 860 aaKnown RBP18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 AGPAT5Q9NUQ2 364 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 TMEM39AQ9NV64 488 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 DMAC2Q9NW81 257 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 TNFSF13BQ9Y275 285 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 A0A1B0GUA9 196 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 KIAA0355O15063 1070 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 PARNO95453 639 aaKnown RBP18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 GHRP10912 638 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 GARTP22102 1010 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 ATF7IP2Q5U623 682 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 AOPEPQ8N6M6 819 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 WNT8AQ9H1J5 351 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 ERVK-5Q9HDB9 667 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 ST3GAL5Q9UNP4 418 aa18.16■□□□□ 0.5
CCDC90B-202ENST00000455220 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 GPR182O15218 404 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 CLIC2O15247 247 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 NR3C1P04150 777 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 GPNMBQ14956 572 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 SLFN12LQ6IEE8 588 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 CBWD1Q9BRT8 395 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 PDZD7Q9H5P4 517 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 PADI3Q9ULW8 664 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 NFE2L3Q9Y4A8 694 aa18.15■□□□□ 0.5
CCDC90B-202ENST00000455220 A0A0B4J269 797 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 TRIM43BA6NCK2 446 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 CCDC85CA6NKD9 419 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 NBNO60934 754 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 NR2F2P24468 414 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 RPL13P26373 211 aaKnown RBP18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 CD52P31358 61 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 MCL1Q07820 350 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 NCBP1Q09161 790 aaKnown RBP18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 PAK2Q13177 524 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 EEF1DP3Q658K8 133 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 ARMCX5Q6P1M9 558 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 MPZL3Q6UWV2 235 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 LUZP1Q86V48 1076 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 CSGALNACT2Q8N6G5 542 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 TRIM43Q96BQ3 446 aaPredicted RBP18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 CCDC51Q96ER9 411 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 CPB2Q96IY4 423 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 ZBTB45Q96K62 511 aaPredicted RBP18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 CEP63Q96MT8 703 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 PPP1R12CQ9BZL4 782 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 HAPLN2Q9GZV7 340 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 HSD3B7Q9H2F3 369 aa18.14■□□□□ 0.49
CCDC90B-202ENST00000455220 N4BP3O15049 544 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 KIAA0391O15091 583 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 CLDN3O15551 220 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 CYP2C18P33260 490 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 ADAM9Q13443 819 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 NOTUMQ6P988 496 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 FAM43BQ6ZT52 329 aaPredicted RBP18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 NOC3LQ8WTT2 800 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 POMGNT1Q8WZA1 660 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 RBSNQ9H1K0 784 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 CHST12Q9NRB3 414 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 HSPBP1Q9NZL4 362 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 PIN4Q9Y237 131 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 BECN2A8MW95 431 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 CETN3O15182 167 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 TIMP1P01033 207 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 CXCL10P02778 98 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 NFX1Q12986 1120 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 NOLC1Q14978 699 aaKnown RBP eCLIP18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 TMEM132AQ24JP5 1023 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 ZNF568Q3ZCX4 644 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 SLC27A1Q6PCB7 646 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 FBXL18Q96ME1 805 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 HTATIP2Q9BUP3 242 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 SRRTQ9BXP5 876 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 CDT1Q9H211 546 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 THAP9Q9H5L6 903 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 ANKFY1Q9P2R3 1169 aa18.13■□□□□ 0.49
CCDC90B-202ENST00000455220 SCN5AQ14524 2016 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 FAM189A1O60320 539 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 FGFR1OPO95684 399 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 MCF2P10911 925 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 CYP2J2P51589 502 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 CCL23P55773 120 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 TPD52L1Q16890 204 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 PLEKHG4Q58EX7 1191 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 CDKAL1Q5VV42 579 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 CDR2LQ86X02 465 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 IRF2BP1Q8IU81 584 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 XXYLT1Q8NBI6 393 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 RNF214Q8ND24 703 aa18.12■□□□□ 0.49
CCDC90B-202ENST00000455220 TET1Q8NFU7 2136 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms