RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 LIG4P49917 911 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 MYL5Q02045 173 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 ENPEPQ07075 957 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 MCL1Q07820 350 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 NCBP1Q09161 790 aaKnown RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 HSP90AA2PQ14568 343 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 ATF7IP2Q5U623 682 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 SPATA1Q5VX52 437 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 ANKRD40Q6AI12 368 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 LRRC55Q6ZSA7 311 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 CATSPER4Q7RTX7 472 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 NELFCDQ8IXH7 590 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 NOC3LQ8WTT2 800 aaKnown RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 ZNF668Q96K58 619 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 PPP1R16BQ96T49 567 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 MKNK1Q9BUB5 465 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 HTATIP2Q9BUP3 242 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 TARS2Q9BW92 718 aaKnown RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 WNT8AQ9H1J5 351 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 AGO3Q9H9G7 860 aaKnown RBP12.32□□□□□ -0.44
TRAF4-206ENST00000454852 TMEM39AQ9NV64 488 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 ST3GAL5Q9UNP4 418 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 CTNND2Q9UQB3 1225 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
TRAF4-206ENST00000454852 A0A0B4J269 797 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 TTLL13PA6NNM8 815 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 SMTNL1A8MU46 457 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 ANKRD63C9JTQ0 380 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 N4BP3O15049 544 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 B4GALT5O43286 388 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 FAM189A1O60320 539 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
TRAF4-206ENST00000454852 NR3C1P04150 777 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 MCF2P10911 925 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 DSC3Q14574 896 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 PLEKHG4Q58EX7 1191 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 KLHL10Q6JEL2 608 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 NOTUMQ6P988 496 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 MPZL3Q6UWV2 235 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 DHX40Q8IX18 779 aaKnown RBP12.31□□□□□ -0.44
TRAF4-206ENST00000454852 TNS4Q8IZW8 715 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 APBB2Q92870 758 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 PDZD7Q9H5P4 517 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 PADI3Q9ULW8 664 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 UMODL1Q5DID0 1318 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 DNAH12Q6ZR08 3092 aa12.31□□□□□ -0.44
TRAF4-206ENST00000454852 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 SLC16A3O15427 465 aaKnown RBP12.3□□□□□ -0.44
TRAF4-206ENST00000454852 CLDN3O15551 220 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 NBNO60934 754 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 FGFR1OPO95684 399 aaKnown RBP12.3□□□□□ -0.44
TRAF4-206ENST00000454852 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
TRAF4-206ENST00000454852 GHRP10912 638 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 ZNF18P17022 549 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 NR2F2P24468 414 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 MARSP56192 900 aaKnown RBP12.3□□□□□ -0.44
TRAF4-206ENST00000454852 PAK2Q13177 524 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 KYAT1Q16773 422 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 DCAF4L1Q3SXM0 396 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 CDKAL1Q5VV42 579 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 MFSD5Q6N075 450 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 SLC27A1Q6PCB7 646 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-206ENST00000454852 FILIP1Q7Z7B0 1213 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 CSGALNACT2Q8N6G5 542 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 TRIM43Q96BQ3 446 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-206ENST00000454852 BICD1Q96G01 975 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 FTHL17Q9BXU8 183 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 OSBPL7Q9BZF2 842 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 HAPLN2Q9GZV7 340 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 IKZF4Q9H2S9 585 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 TMX1Q9H3N1 280 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 THAP9Q9H5L6 903 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 KIAA1586Q9HCI6 787 aa12.3□□□□□ -0.44
TRAF4-206ENST00000454852 TISP43B9A030 160 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 CETN3O15182 167 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 OGTO15294 1046 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 EXTL3O43909 919 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 ZNF623O75123 536 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 GNA14O95837 355 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 PFKMP08237 780 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 FGFR4P22455 802 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 CD52P31358 61 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 STX17P56962 302 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 ADAM9Q13443 819 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 NOLC1Q14978 699 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAF4-206ENST00000454852 UBXN11Q5T124 520 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 EEF1DP3Q658K8 133 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 ARMCX5Q6P1M9 558 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 XXYLT1Q8NBI6 393 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 POMGNT1Q8WZA1 660 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
TRAF4-206ENST00000454852 ADPGKQ9BRR6 497 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms