RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 TRAF1Q13077 416 aa12□□□□□ -0.49
DDR1-240ENST00000454612 TRPC3Q13507 836 aa12□□□□□ -0.49
DDR1-240ENST00000454612 SPOPLQ6IQ16 392 aa12□□□□□ -0.49
DDR1-240ENST00000454612 SCYL2Q6P3W7 929 aa12□□□□□ -0.49
DDR1-240ENST00000454612 PRUNE1Q86TP1 453 aa12□□□□□ -0.49
DDR1-240ENST00000454612 CPNE8Q86YQ8 564 aa12□□□□□ -0.49
DDR1-240ENST00000454612 RNF10Q8N5U6 811 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 HNRNPLLQ8WVV9 542 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 RAB17Q9H0T7 212 aa12□□□□□ -0.49
DDR1-240ENST00000454612 AGPAT3Q9NRZ7 376 aa12□□□□□ -0.49
DDR1-240ENST00000454612 INTS9Q9NV88 658 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 COX16Q9P0S2 106 aa12□□□□□ -0.49
DDR1-240ENST00000454612 ZNF70Q9UC06 446 aaPredicted RBP12□□□□□ -0.49
DDR1-240ENST00000454612 NOP56O00567 594 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 DDX3XO00571 662 aaKnown RBP eCLIP12□□□□□ -0.495e-7■■■■■ 37.9
DDR1-240ENST00000454612 GAP43P17677 238 aa12□□□□□ -0.49
DDR1-240ENST00000454612 FLT3P36888 993 aa12□□□□□ -0.49
DDR1-240ENST00000454612 NSFP46459 744 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 MARCKSL1P49006 195 aa12□□□□□ -0.49
DDR1-240ENST00000454612 RPS6P62753 249 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 ERVK-9P63128 1117 aa12□□□□□ -0.49
DDR1-240ENST00000454612 HHIPL2Q6UWX4 724 aa12□□□□□ -0.49
DDR1-240ENST00000454612 IL31RAQ8NI17 732 aa12□□□□□ -0.49
DDR1-240ENST00000454612 WRNIP1Q96S55 665 aa12□□□□□ -0.49
DDR1-240ENST00000454612 PLVAPQ9BX97 442 aa12□□□□□ -0.49
DDR1-240ENST00000454612 MAP3K6O95382 1288 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 TPCN2Q8NHX9 752 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 SLC35C1Q96A29 364 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 HSPBP1Q9NZL4 362 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 NR2E1Q9Y466 385 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 INO80B-WBP1J3KQ70 363 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 NOL4O94818 638 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 COMTP21964 271 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 YY1P25490 414 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 YWHABP31946 246 aaKnown RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 QARSP47897 775 aaKnown RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 CORO7P57737 925 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 GADL1Q6ZQY3 521 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 CACNA2D3Q8IZS8 1091 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 C9orf72Q96LT7 481 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 INO80BQ9C086 356 aaPredicted RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 RNF19AQ9NV58 838 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 SPATA31C1P0DKV0 1188 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 HSD17B3P37058 310 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 LONRF1Q17RB8 773 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 STYK1Q6J9G0 422 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 WDR93Q6P2C0 686 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 DLK2Q6UY11 383 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 FRMD5Q7Z6J6 570 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 KRT35Q92764 455 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 IQCDQ96DY2 449 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 NLRP4Q96MN2 994 aa11.99□□□□□ -0.49
DDR1-240ENST00000454612 NAP1L3Q99457 506 aaPredicted RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 ALG13Q9NP73 1137 aaKnown RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.99□□□□□ -0.49
DDR1-240ENST00000454612 IRS2Q9Y4H2 1338 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 CHUKO15111 745 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 ELF1P32519 619 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 SLC12A3P55017 1021 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 CCDC137Q6PK04 289 aaKnown RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 SLC47A2Q86VL8 602 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 ATG4CQ96DT6 458 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 P2RX7Q99572 595 aaKnown RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 MMEP08473 750 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 HNRNPH1P31943 449 aaKnown RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 BFSP1Q12934 665 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 TMEM119Q4V9L6 283 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 TRIM68Q6AZZ1 485 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 ZNF564Q8TBZ8 553 aaPredicted RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 SPDL1Q96EA4 605 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 PBKQ96KB5 322 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 PWWP2AQ96N64 755 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 AGPAT1Q99943 283 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 APOL6Q9BWW8 343 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 ZWILCHQ9H900 591 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 APEX2Q9UBZ4 518 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 MYH8P13535 1937 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 A0A1W2PQJ5 194 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 SKAP2O75563 359 aaPredicted RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 ASNSP08243 561 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 PSEN1P49768 467 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 SNCBQ16143 134 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 BRDTQ58F21 947 aaPredicted RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 PPP1R21Q6ZMI0 780 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 USP37Q86T82 979 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 TBC1D1Q86TI0 1168 aaPredicted RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 ARHGEF19Q8IW93 802 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 FBXO25Q8TCJ0 367 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 YIPF3Q9GZM5 350 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
DDR1-240ENST00000454612 PCSK1NQ9UHG2 260 aa11.98□□□□□ -0.49
DDR1-240ENST00000454612 MFAP3P55082 362 aa11.97□□□□□ -0.49
DDR1-240ENST00000454612 RRP1BQ14684 758 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms