RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ALDH2P05091 517 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 NAMPTP43490 491 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 SLC11A1P49279 550 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 ATP2C1P98194 919 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-203ENST00000454233 GIT2Q14161 759 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 ECM1Q16610 540 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 MAPK6Q16659 721 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 FAM187BQ17R55 369 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 CDCA2Q69YH5 1023 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-203ENST00000454233 ZNF280BQ86YH2 543 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 VPS52Q8N1B4 723 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 MRPL43Q8N983 215 aaKnown RBP11.81□□□□□ -0.52
DDX39A-203ENST00000454233 SMRP1Q8NCR6 262 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 FZD8Q9H461 694 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 CD320Q9NPF0 282 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 DNAJB4Q9UDY4 337 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 FAN1Q9Y2M0 1017 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 GIT1Q9Y2X7 761 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 HES2Q9Y543 173 aa11.81□□□□□ -0.52
DDX39A-203ENST00000454233 BDP1A6H8Y1 2624 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 C2orf71A6NGG8 1288 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 ARL5CA6NH57 179 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 PP2D1A8MPX8 630 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 N4BP3O15049 544 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 NR1I2O75469 434 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 DDHD2O94830 711 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 PRKCBP05771 671 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 LIG1P18858 919 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 MLH1P40692 756 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 AFF1P51825 1210 aaKnown RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 EFNA5P52803 228 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 ZP2Q05996 745 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 PRPF4BQ13523 1007 aaKnown RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 ZRSR1Q15695 479 aaKnown RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 ARL6IP4Q66PJ3 421 aaKnown RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 LLGL2Q6P1M3 1020 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 TMEM173Q86WV6 379 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 CDR2LQ86X02 465 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 BSNDQ8WZ55 320 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 CASP10Q92851 521 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 CDK5RAP3Q96JB5 506 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 GAD1Q99259 594 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 ADPGKQ9BRR6 497 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 ZBP1Q9H171 429 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 NXF3Q9H4D5 531 aaKnown RBP11.8□□□□□ -0.52
DDX39A-203ENST00000454233 PARP2Q9UGN5 583 aa11.8□□□□□ -0.52
DDX39A-203ENST00000454233 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 E9PMD0 336 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 ACKR2O00590 384 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 NRP1O14786 923 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 INPPL1O15357 1258 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 B4GALT3O60512 393 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 BMP15O95972 392 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 CTSAP10619 480 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 HOXB8P17481 243 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-203ENST00000454233 PDCP20941 246 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 AKAP5P24588 427 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 CDC25AP30304 524 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 OR1G1P47890 313 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 SCNN1GP51170 649 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
DDX39A-203ENST00000454233 CUL4AQ13619 759 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 IL17AQ16552 155 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 ANKRD54Q6NXT1 300 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 TMEM184AQ6ZMB5 413 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 VN1R2Q8NFZ6 395 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 DRC1Q96MC2 740 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 ZFP42Q96MM3 310 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 NT5C3AQ9H0P0 336 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 EPHX3Q9H6B9 360 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 DAXXQ9UER7 740 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-203ENST00000454233 USP15Q9Y4E8 981 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-203ENST00000454233 ZMYM2Q9UBW7 1377 aa11.79□□□□□ -0.52
DDX39A-203ENST00000454233 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-203ENST00000454233 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 PI4K2BG5E9Z4 385 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 CLASP2O75122 1294 aaKnown RBP11.78□□□□□ -0.52
DDX39A-203ENST00000454233 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX39A-203ENST00000454233 ALADP13716 330 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 KCNC3Q14003 757 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 APBB1IPQ7Z5R6 666 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-203ENST00000454233 COLGALT2Q8IYK4 626 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 BCL7CQ8WUZ0 217 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-203ENST00000454233 AUTS2Q8WXX7 1259 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 MMTAG2Q9BU76 263 aaKnown RBP11.78□□□□□ -0.52
DDX39A-203ENST00000454233 TIPINQ9BVW5 301 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 COLEC11Q9BWP8 271 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 EMILIN2Q9BXX0 1053 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 CCDC113Q9H0I3 377 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 PDZD7Q9H5P4 517 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 POLD4Q9HCU8 107 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 KLK14Q9P0G3 267 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms