RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 KLC3Q6P597 504 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 KCNB2Q92953 911 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 WWP1Q9H0M0 922 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 IP6K2Q9UHH9 426 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
SEC16A-207ENST00000453963 CCT8L1PA6NM43 557 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 PHF2O75151 1096 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 KRT7P08729 469 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 CARSP49589 748 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 TSTA3Q13630 321 aaPredicted RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 SCARF1Q14162 830 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ZBED8Q8IZ13 594 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ICA1LQ8NDH6 482 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 VPS39Q96JC1 886 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 AGPAT1Q99943 283 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 SLC16A3O15427 465 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 MCF2P10911 925 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 SERPINB4P48594 390 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 OCRLQ01968 901 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 NUDCD3Q8IVD9 361 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 SRBD1Q8N5C6 995 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 TEX9Q8N6V9 391 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 PPM1NQ8N819 430 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 IL25Q9H293 177 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ASNSD1Q9NWL6 643 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 TMEM260Q9NX78 707 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ZBTB7AO95365 584 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ITIH2P19823 946 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP11P51784 963 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 NOP14P78316 857 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 HSPH1Q92598 858 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 BTBD6Q96KE9 485 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 SLC40A1Q9NP59 571 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 NGRNQ9NPE2 291 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 MADDQ8WXG6 1647 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ADGRB3O60242 1522 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 RAD51CO43502 376 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 SLC1A1P43005 524 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 NAB2Q15742 525 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 Q3C1V9 767 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 ZNF746Q6NUN9 644 aaPredicted RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 LRRC31Q6UY01 552 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 C1orf54Q8WWF1 131 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 HEXIM2Q96MH2 286 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 PNKPQ96T60 521 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 TRABDQ9H4I3 376 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 PPCSQ9HAB8 311 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.79□□□□□ -0.36
SEC16A-207ENST00000453963 UNC13BO14795 1591 aa12.79□□□□□ -0.36
SEC16A-207ENST00000453963 GSTA4O15217 222 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 RTN2O75298 545 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 TDP2O95551 362 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 TAC1P20366 129 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 TBXAS1P24557 533 aaPredicted RBP12.78□□□□□ -0.36
SEC16A-207ENST00000453963 INPP1P49441 399 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 ZNF667Q5HYK9 610 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
SEC16A-207ENST00000453963 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 SIX6OS1Q8N1H7 587 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 DTNBP1Q96EV8 351 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 FAM84BQ96KN1 310 aaPredicted RBP12.78□□□□□ -0.36
SEC16A-207ENST00000453963 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 GOLGA8MH3BSY2 632 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 PGM1P36871 562 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 SEC24CP53992 1094 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 GALCP54803 685 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 SLC30A9Q6PML9 568 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 USP49Q70CQ1 688 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 CNPY4Q8N129 248 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 ERGIC2Q96RQ1 377 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 STK33Q9BYT3 514 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 JCADQ9P266 1359 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 SNAP25P60880 206 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 COPS2P61201 443 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms