RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 DDIT3P35638 169 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 ME1P48163 572 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 KRT85P78386 507 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
VPS8-213ENST00000453056 RNASELQ05823 741 aaKnown RBP17.07■□□□□ 0.32
VPS8-213ENST00000453056 DCAF4L1Q3SXM0 396 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 THNSL1Q8IYQ7 743 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 COLGALT1Q8NBJ5 622 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 PPM1EQ8WY54 764 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 ZNF558Q96NG5 402 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 REEP2Q9BRK0 252 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 EIF2AQ9BY44 585 aaKnown RBP17.07■□□□□ 0.32
VPS8-213ENST00000453056 MRPL4Q9BYD3 311 aaKnown RBP17.07■□□□□ 0.32
VPS8-213ENST00000453056 TMEM134Q9H6X4 195 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 SLC16A4O15374 487 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 STRN3Q13033 797 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 SKIV2LQ15477 1246 aaKnown RBP17.06■□□□□ 0.32
VPS8-213ENST00000453056 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 AGMOQ6ZNB7 445 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 SV2BQ7L1I2 683 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 APOL6Q9BWW8 343 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 PDZD7Q9H5P4 517 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 CWH43Q9H720 699 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 KANSL3Q9P2N6 904 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 CITO14578 2027 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 NCOR1O75376 2440 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
VPS8-213ENST00000453056 PLXNA4Q9HCM2 1894 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 OFD1O75665 1012 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 ABCD1P33897 745 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
VPS8-213ENST00000453056 UBE3AQ05086 875 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 CCDC85BQ15834 202 aaPredicted RBP17.05■□□□□ 0.32
VPS8-213ENST00000453056 ATF7IP2Q5U623 682 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 KLHL23Q8NBE8 558 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 SMG8Q8ND04 991 aaKnown RBP17.05■□□□□ 0.32
VPS8-213ENST00000453056 PPP2R3CQ969Q6 453 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 FAM193BQ96PV7 902 aaPredicted RBP17.05■□□□□ 0.32
VPS8-213ENST00000453056 NXF3Q9H4D5 531 aaKnown RBP17.05■□□□□ 0.32
VPS8-213ENST00000453056 ZHX3Q9H4I2 956 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 TBC1D13Q9NVG8 400 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 FAM13BQ9NYF5 915 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 HCSTQ9UBK5 93 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 PLAGL2Q9UPG8 496 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 GIT1Q9Y2X7 761 aa17.05■□□□□ 0.32
VPS8-213ENST00000453056 MEIS3P2A8K0S8 358 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 GRM6O15303 877 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 ZC3H11AO75152 810 aaKnown RBP eCLIP17.04■□□□□ 0.32
VPS8-213ENST00000453056 ITGB1P05556 798 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 ALDH7A1P49419 539 aaKnown RBP17.04■□□□□ 0.32
VPS8-213ENST00000453056 ZNF131P52739 623 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 NUCB2P80303 420 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 KCNT2Q6UVM3 1135 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 CDR2LQ86X02 465 aaPredicted RBP17.04■□□□□ 0.32
VPS8-213ENST00000453056 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 PDILTQ8N807 584 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 TMEM161BQ8NDZ6 487 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 RPS6KC1Q96S38 1066 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 PYM1Q9BRP8 204 aaKnown RBP17.04■□□□□ 0.32
VPS8-213ENST00000453056 NTPCRQ9BSD7 190 aaKnown RBP17.04■□□□□ 0.32
VPS8-213ENST00000453056 CUEDC2Q9H467 287 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 NSUN3Q9H649 340 aaKnown RBP17.04■□□□□ 0.32
VPS8-213ENST00000453056 HES2Q9Y543 173 aa17.04■□□□□ 0.32
VPS8-213ENST00000453056 TRIP11Q15643 1979 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 K7ENM7 598 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 FGF18O76093 207 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 MAPTP10636 758 aaKnown RBP17.03■□□□□ 0.32
VPS8-213ENST00000453056 MLH1P40692 756 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 GIT2Q14161 759 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 ZNF568Q3ZCX4 644 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 NT5DC1Q5TFE4 455 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 FAM178BQ8IXR5 827 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 IQUBQ8NA54 791 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 SPATA32Q96LK8 384 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 GAD1Q99259 594 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 LRRC27Q9C0I9 530 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 ALG13Q9NP73 1137 aaKnown RBP17.03■□□□□ 0.32
VPS8-213ENST00000453056 SPG21Q9NZD8 308 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 PARP2Q9UGN5 583 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 PUF60Q9UHX1 559 aaKnown RBP17.03■□□□□ 0.32
VPS8-213ENST00000453056 RCOR1Q9UKL0 485 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 TNFSF13BQ9Y275 285 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 ZDHHC9Q9Y397 364 aa17.03■□□□□ 0.32
VPS8-213ENST00000453056 ARL5CA6NH57 179 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 TTLL13PA6NNM8 815 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 INPPL1O15357 1258 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 GAP43P17677 238 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 NCKAP1LP55160 1127 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 BCAR1P56945 870 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 KRT17Q04695 432 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 AXDND1Q5T1B0 1012 aaPredicted RBP17.02■□□□□ 0.32
VPS8-213ENST00000453056 EEF1DP3Q658K8 133 aa17.02■□□□□ 0.32
VPS8-213ENST00000453056 SHC4Q6S5L8 630 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms