RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 SLITRK6Q9H5Y7 841 aa5.39□□□□□ -1.55
USP40-209ENST00000452724 DPP7Q9UHL4 492 aa5.39□□□□□ -1.55
USP40-209ENST00000452724 EVLQ9UI08 416 aaPredicted RBP5.39□□□□□ -1.55
USP40-209ENST00000452724 CDY2AQ9Y6F7 541 aa5.39□□□□□ -1.55
USP40-209ENST00000452724 SHTN1A0MZ66 631 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 PPM1GO15355 546 aaPredicted RBP5.38□□□□□ -1.55
USP40-209ENST00000452724 DAPK3O43293 454 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 SEC24DO94855 1032 aaPredicted RBP5.38□□□□□ -1.55
USP40-209ENST00000452724 FSBPO95073 299 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 NRG3P56975 720 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 ATP2C1P98194 919 aaPredicted RBP5.38□□□□□ -1.55
USP40-209ENST00000452724 KLF10Q13118 480 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 FHL2Q14192 279 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 MUM1Q2TAK8 710 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 PGM2L1Q6PCE3 622 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 LMBR1LQ6UX01 489 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 KCNK18Q7Z418 384 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 CLEC14AQ86T13 490 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 GLB1L2Q8IW92 636 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 IL17DQ8TAD2 202 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 PPP1R14CQ8TAE6 165 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 PARPBPQ9NWS1 579 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 MKS1Q9NXB0 559 aa5.38□□□□□ -1.55
USP40-209ENST00000452724 RBP3P10745 1247 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 MTNR1BP49286 362 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 ADCY7P51828 1080 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 BPIFB4P59827 614 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 CDK17Q00537 523 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 MGAT5Q09328 741 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 TCIRG1Q13488 830 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 TUBA3CQ13748 450 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 CLUL1Q15846 466 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 GAGE13Q4V321 117 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 KRT40Q6A162 431 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 TUBA3EQ6PEY2 450 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 TSPEARQ8WU66 669 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 FUBP3Q96I24 572 aaKnown RBP eCLIP5.37□□□□□ -1.55
USP40-209ENST00000452724 FAXDC2Q96IV6 333 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 ZNF703Q9H7S9 590 aaPredicted RBP5.37□□□□□ -1.55
USP40-209ENST00000452724 IFT122Q9HBG6 1241 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 SPEF1Q9Y4P9 236 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 RBM8AQ9Y5S9 174 aaKnown RBP5.37□□□□□ -1.55
USP40-209ENST00000452724 GPR45Q9Y5Y3 372 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 TNKSO95271 1327 aa5.37□□□□□ -1.55
USP40-209ENST00000452724 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 C2orf78A6NCI8 922 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 FZD9O00144 591 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 LY86O95711 162 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 C1SP09871 688 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 GAAP10253 952 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 OSMP13725 252 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 AGXTP21549 392 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 SLC5A3P53794 718 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 CD69Q07108 199 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 PTPN21Q16825 1174 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 GSPT2Q8IYD1 628 aaKnown RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 UNC5BQ8IZJ1 945 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 ANKRD53Q8N9V6 530 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 PLA2G15Q8NCC3 412 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 CACTINQ8WUQ7 758 aaKnown RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 MIEF2Q96C03 454 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 RPL10LQ96L21 214 aaKnown RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 PUS7Q96PZ0 661 aaKnown RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 UIMC1Q96RL1 719 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 AGO3Q9H9G7 860 aaKnown RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 ZNF277Q9NRM2 450 aaPredicted RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 ING1Q9UK53 422 aaPredicted RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 RCAN3Q9UKA8 241 aa5.36□□□□□ -1.55
USP40-209ENST00000452724 WDR33Q9C0J8 1336 aaKnown RBP5.36□□□□□ -1.55
USP40-209ENST00000452724 PLSCR1O15162 318 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 XPOTO43592 962 aaKnown RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 NARSO43776 548 aaKnown RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 ADH4P08319 380 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 MAKP20794 623 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 KRT85P78386 507 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 DGCR2P98153 550 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 PURAQ00577 322 aaKnown RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 CNGB1Q14028 1251 aaPredicted RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 ACAP2Q15057 778 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 PCBP2Q15366 365 aaKnown RBP eCLIP5.35□□□□□ -1.55
USP40-209ENST00000452724 PLEKHG6Q3KR16 790 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 MBNL2Q5VZF2 373 aaKnown RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 TMPRSS6Q8IU80 811 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 AMER2Q8N7J2 671 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 PIK3C3Q8NEB9 887 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 ZNF483Q8TF39 744 aaPredicted RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 SSH1Q8WYL5 1049 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 TCF25Q9BQ70 676 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 ACE2Q9BYF1 805 aaPredicted RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 SLC13A1Q9BZW2 595 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 C14orf93Q9H972 538 aaKnown RBP5.35□□□□□ -1.55
USP40-209ENST00000452724 MRFAP1Q9Y605 127 aa5.35□□□□□ -1.55
USP40-209ENST00000452724 A0A1W2PR48 441 aa5.34□□□□□ -1.55
USP40-209ENST00000452724 KLHL33A6NCF5 533 aa5.34□□□□□ -1.55
USP40-209ENST00000452724 PCDHGA12O60330 932 aa5.34□□□□□ -1.55
USP40-209ENST00000452724 ALDH1L1O75891 902 aa5.34□□□□□ -1.55
USP40-209ENST00000452724 PEX11BO96011 259 aa5.34□□□□□ -1.55
USP40-209ENST00000452724 JUNP05412 331 aaKnown RBP5.34□□□□□ -1.55
USP40-209ENST00000452724 VSIG10L2P0DP72 767 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms