RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NOL4O94818 638 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 PSMG1O95456 288 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 FGFR1OPO95684 399 aaKnown RBP9.23□□□□□ -0.93
LSM5-208ENST00000450169 POTEJP0CG39 1038 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 PAX3P23760 479 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 NEK3P51956 506 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 DRG2P55039 364 aaKnown RBP9.23□□□□□ -0.93
LSM5-208ENST00000450169 R3HDM1Q15032 1099 aaKnown RBP9.23□□□□□ -0.93
LSM5-208ENST00000450169 PPP2R5BQ15173 497 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 LONRF1Q17RB8 773 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 ZCWPW2Q504Y3 356 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 ACSBG2Q5FVE4 666 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 TBC1D9BQ66K14 1250 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 CNNM4Q6P4Q7 775 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 ARHGEF18Q6ZSZ5 1173 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 JAMLQ86YT9 394 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 MAP7D3Q8IWC1 876 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 RDH13Q8NBN7 331 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 STMN2Q93045 179 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 MTA3Q9BTC8 594 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 PUS3Q9BZE2 481 aaKnown RBP9.23□□□□□ -0.93
LSM5-208ENST00000450169 TRIM9Q9C026 710 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 BRD8Q9H0E9 1235 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 KRT82Q9NSB4 513 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 GRHL1Q9NZI5 618 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 ZNF212Q9UDV6 495 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 RASAL2Q9UJF2 1139 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 TTC7AQ9ULT0 858 aaPredicted RBP9.23□□□□□ -0.93
LSM5-208ENST00000450169 PKD1L3Q7Z443 1732 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 UMODL1Q5DID0 1318 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 SLIT3O75094 1523 aa9.23□□□□□ -0.93
LSM5-208ENST00000450169 DDX3XO00571 662 aaKnown RBP eCLIP9.22□□□□□ -0.932e-12■■■■□ 20.9
LSM5-208ENST00000450169 ATP9BO43861 1147 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 BRAFP15056 766 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 TAC1P20366 129 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 OXCT1P55809 520 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 STRN3Q13033 797 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 DHX34Q14147 1143 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 MPP2Q14168 576 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 ALX1Q15699 326 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
LSM5-208ENST00000450169 SLC44A4Q53GD3 710 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 COBLL1Q53SF7 1204 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 CFAP157Q5JU67 520 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 FAM133AQ8N9E0 248 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 KIAA0895Q8NCT3 520 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 DTX3LQ8TDB6 740 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SNRNP27Q8WVK2 155 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 IRGQQ8WZA9 623 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 PPP2R3CQ969Q6 453 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 RUNDC3BQ96NL0 473 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SMC6Q96SB8 1091 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 LBHD1Q9BQE6 289 aaPredicted RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 SYNCQ9H7C4 482 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 MAGEF1Q9HAY2 307 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 EPB41L4AQ9HCS5 686 aaPredicted RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 STK32BQ9NY57 414 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 PARP2Q9UGN5 583 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 STXBP5LQ9Y2K9 1186 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 STARD13Q9Y3M8 1113 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 KIF1AQ12756 1690 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 PFASO15067 1338 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 FAM196BA6NMK8 535 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 HNRNPCL1O60812 293 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 IDH1O75874 414 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 NUDT7P0C024 238 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 RARGP13631 454 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 IDO1P14902 403 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 ALOX15P16050 662 aaPredicted RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 COPB2P35606 906 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 MLH1P40692 756 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 CD97P48960 835 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 ADARP55265 1226 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 FUT2Q10981 343 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 MAPK7Q13164 816 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 UBE3CQ15386 1083 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 ASIC2Q16515 512 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SPDYAQ5MJ70 313 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 DTHD1Q6ZMT9 781 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SLFN11Q7Z7L1 901 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SULF1Q8IWU6 871 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SYCE1Q8N0S2 351 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 C4orf32Q8N8J7 132 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 LRRC15Q8TF66 581 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 DDX17Q92841 729 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 HES6Q96HZ4 224 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 SERPINB12Q96P63 405 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 STRBPQ96SI9 672 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 MIPEPQ99797 713 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 LSM14BQ9BX40 385 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 NKIRAS1Q9NYS0 192 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 PTTG2Q9NZH5 202 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 TMEM98Q9Y2Y6 226 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 RTL9Q8NET4 1388 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 CHD4Q14839 1912 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 XIRP1Q702N8 1843 aaKnown RBP9.22□□□□□ -0.93
LSM5-208ENST00000450169 ZNF532Q9HCE3 1301 aa9.22□□□□□ -0.93
LSM5-208ENST00000450169 ALS2Q96Q42 1657 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 NPHP3-ACAD11A0A0J9YXS1 232 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms