RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MAPK6Q16659 721 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 PARD3BQ8TEW8 1205 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 ZBTB10Q96DT7 871 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 FAM213AQ9BRX8 229 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 TARS2Q9BW92 718 aaKnown RBP15.51■□□□□ 0.07
USP39-207ENST00000450066 MRPL4Q9BYD3 311 aaKnown RBP15.51■□□□□ 0.07
USP39-207ENST00000450066 NFKBIZQ9BYH8 718 aa15.51■□□□□ 0.07
USP39-207ENST00000450066 AGO2Q9UKV8 859 aaKnown RBP15.51■□□□□ 0.07
USP39-207ENST00000450066 A0A0B4J269 797 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 ZNF233A6NK53 670 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 F2P00734 622 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 TMOD1P28289 359 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 CYLC1P35663 651 aaPredicted RBP15.5■□□□□ 0.07
USP39-207ENST00000450066 CPT1AP50416 773 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 CYP24A1Q07973 514 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 GRIK4Q16099 956 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 SFMBT2Q5VUG0 894 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 MTHFD1LQ6UB35 978 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 AP5M1Q9H0R1 490 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 USP20Q9Y2K6 914 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 DAAM1Q9Y4D1 1078 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 LDHAP00338 332 aaKnown RBP15.5■□□□□ 0.07
USP39-207ENST00000450066 EDN1P05305 212 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 GJB1P08034 283 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 PTENP60484 403 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 MARCH8Q5T0T0 291 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 CCDC42Q96M95 316 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 NLRP4Q96MN2 994 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 INTS2Q9H0H0 1204 aaKnown RBP15.5■□□□□ 0.07
USP39-207ENST00000450066 AIPL1Q9NZN9 384 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 ARHGAP20Q9P2F6 1191 aa15.5■□□□□ 0.07
USP39-207ENST00000450066 RRN3P2A6NIE6 340 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 EIF3CLB5ME19 914 aaKnown RBP15.49■□□□□ 0.07
USP39-207ENST00000450066 TOM1L1O75674 476 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 PRKCBP05771 671 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 AKR1A1P14550 325 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 GTF2H1P32780 548 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 GCLMP48507 274 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 APLP1P51693 650 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 EHBP1Q8NDI1 1231 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 ACRBPQ8NEB7 543 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 LMO3Q8TAP4 145 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 CCDC127Q96BQ5 260 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 LENG1Q96BZ8 264 aaPredicted RBP15.49■□□□□ 0.07
USP39-207ENST00000450066 ZBTB45Q96K62 511 aaPredicted RBP15.49■□□□□ 0.07
USP39-207ENST00000450066 EIF3CQ99613 913 aaKnown RBP15.49■□□□□ 0.07
USP39-207ENST00000450066 MSTO1Q9BUK6 570 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 CFHR5Q9BXR6 569 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 HAPLN2Q9GZV7 340 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 FZD8Q9H461 694 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 FHOD1Q9Y613 1164 aa15.49■□□□□ 0.07
USP39-207ENST00000450066 LRRIQ3A6PVS8 624 aaPredicted RBP15.48■□□□□ 0.07
USP39-207ENST00000450066 ACKR2O00590 384 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 FLT3LGP49771 235 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 MXI1P50539 228 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 KRT83P78385 493 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 SLC9C1Q4G0N8 1177 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 MFSD14CQ5VZR4 134 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 HGSNATQ68CP4 663 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 KAT2BQ92831 832 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 SPAG5Q96R06 1193 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 ACO2Q99798 780 aaKnown RBP15.48■□□□□ 0.07
USP39-207ENST00000450066 TMEM117Q9H0C3 514 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 ANKFY1Q9P2R3 1169 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 GABRQQ9UN88 632 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 NRCAMQ92823 1304 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 SSU72P8A0A1W2PR75 194 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 CLDN3O15551 220 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 SERPING1P05155 500 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 RFX1P22670 979 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 PHKA2P46019 1235 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 JAM2P57087 298 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 CLDN10P78369 228 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
USP39-207ENST00000450066 RAPGEF1Q13905 1077 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 EPC2Q52LR7 807 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 KRT39Q6A163 491 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
USP39-207ENST00000450066 TRIB2Q92519 343 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 IFT122Q9HBG6 1241 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 APEX2Q9UBZ4 518 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
USP39-207ENST00000450066 REXO2Q9Y3B8 237 aaKnown RBP15.48■□□□□ 0.07
USP39-207ENST00000450066 TTLL13PA6NNM8 815 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 INO80B-WBP1J3KQ70 363 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 DUSP11O75319 330 aaKnown RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 IPO7O95373 1038 aaKnown RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 TBC1D8O95759 1140 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 PLEKP08567 350 aaPredicted RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 MATR3P43243 847 aaKnown RBP eCLIP15.47■□□□□ 0.07
USP39-207ENST00000450066 NLRP11P59045 1033 aaKnown RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 ETF1P62495 437 aaKnown RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 SP3Q02447 781 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 MBTD1Q05BQ5 628 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 KIF22Q14807 665 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 PSMD6Q15008 389 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 IQCEQ6IPM2 695 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 CRELD2Q6UXH1 353 aaPredicted RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 TSHZ1Q6ZSZ6 1077 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms