RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.59■■□□□ 1.37
NPAS1-202ENST00000449844 USP20Q9Y2K6 914 aa23.59■■□□□ 1.37
NPAS1-202ENST00000449844 ZNF862O60290 1169 aa23.58■■□□□ 1.37
NPAS1-202ENST00000449844 SUPT20HL2P0C7V6 817 aa23.58■■□□□ 1.37
NPAS1-202ENST00000449844 ERVK-9P63128 1117 aa23.58■■□□□ 1.37
NPAS1-202ENST00000449844 KCTD2Q14681 263 aa23.58■■□□□ 1.37
NPAS1-202ENST00000449844 GTF3C2Q8WUA4 911 aaPredicted RBP23.58■■□□□ 1.37
NPAS1-202ENST00000449844 SPIRE2Q8WWL2 714 aa23.58■■□□□ 1.37
NPAS1-202ENST00000449844 GBA2Q9HCG7 927 aaPredicted RBP23.58■■□□□ 1.37
NPAS1-202ENST00000449844 ZNFX1Q9P2E3 1918 aaKnown RBP23.58■■□□□ 1.37
NPAS1-202ENST00000449844 PGK2P07205 417 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 CETPP11597 493 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 TNFAIP3P21580 790 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 FKBP1BP68106 108 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 PPP3CAQ08209 521 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 DMP1Q13316 513 aaPredicted RBP23.57■■□□□ 1.36
NPAS1-202ENST00000449844 C1orf220Q5T0J3 134 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 MAP4K3Q8IVH8 894 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 GLYCTKQ8IVS8 523 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 TMEM161BQ8NDZ6 487 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 EXOC4Q96A65 974 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 CEP170P1Q96L14 293 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 MROH8Q9H579 483 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 RRAGCQ9HB90 399 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 TBX20Q9UMR3 447 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 CYP2C8P10632 490 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 DNA2P51530 1060 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 EPHB4P54760 987 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 PRKCEQ02156 737 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 ARHGAP44Q17R89 818 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 GSPT2Q8IYD1 628 aaKnown RBP23.57■■□□□ 1.36
NPAS1-202ENST00000449844 USP38Q8NB14 1042 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 NTPCRQ9BSD7 190 aaKnown RBP23.57■■□□□ 1.36
NPAS1-202ENST00000449844 PSD3Q9NYI0 1048 aa23.57■■□□□ 1.36
NPAS1-202ENST00000449844 SUCLA2Q9P2R7 463 aaPredicted RBP23.57■■□□□ 1.36
NPAS1-202ENST00000449844 SEPT9Q9UHD8 586 aaPredicted RBP23.57■■□□□ 1.36
NPAS1-202ENST00000449844 IGSF9BQ9UPX0 1349 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 KCNK3O14649 394 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 UBA1P22314 1058 aaKnown RBP23.56■■□□□ 1.36
NPAS1-202ENST00000449844 NPTX2P47972 431 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 GTF2A2P52657 109 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 MKRN3Q13064 507 aaKnown RBP23.56■■□□□ 1.36
NPAS1-202ENST00000449844 DNAAF5Q86Y56 855 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 ACTRT1Q8TDG2 376 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 RFFLQ8WZ73 363 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 ADAM21Q9UKJ8 722 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 STXBP5LQ9Y2K9 1186 aa23.56■■□□□ 1.36
NPAS1-202ENST00000449844 CCDC169A6NNP5 214 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 FOXN3O00409 490 aaPredicted RBP23.55■■□□□ 1.36
NPAS1-202ENST00000449844 STBD1O95210 358 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 GCLMP48507 274 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 TNNC1P63316 161 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 SLC7A5Q01650 507 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 EMBQ6PCB8 327 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 PEX26Q7Z412 305 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 UBE2TQ9NPD8 197 aaPredicted RBP23.55■■□□□ 1.36
NPAS1-202ENST00000449844 TMEM59LQ9UK28 342 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 CCL15-CCL14A0A0B4J2E2 113 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 MXI1P50539 228 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 CCL15Q16663 113 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 IFT20Q8IY31 132 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 SHCBP1Q8NEM2 672 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 PLEKHO2Q8TD55 490 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 CTNNBL1Q8WYA6 563 aaPredicted RBP23.55■■□□□ 1.36
NPAS1-202ENST00000449844 KMT5AQ9NQR1 393 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 VPS18Q9P253 973 aa23.55■■□□□ 1.36
NPAS1-202ENST00000449844 SYNGAP1Q96PV0 1343 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 PDHXO00330 501 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 RTP1P59025 263 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 EEPD1Q7L9B9 569 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 C2orf69Q8N8R5 385 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 MS4A4AQ96JQ5 239 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 FGD4Q96M96 766 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 AGPAT1Q99943 283 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 ZNF302Q9NR11 478 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 GDF3Q9NR23 364 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 DNAJC25-GNG10A0A024R161 153 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 ATG7O95352 703 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 ZBTB48P10074 688 aaPredicted RBP23.54■■□□□ 1.36
NPAS1-202ENST00000449844 NNTQ13423 1086 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 NEDD9Q14511 834 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 ARHGEF19Q8IW93 802 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 MCPH1Q8NEM0 835 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 TMEM117Q9H0C3 514 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 FAN1Q9Y2M0 1017 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 SLC45A1Q9Y2W3 748 aa23.54■■□□□ 1.36
NPAS1-202ENST00000449844 MCM3APO60318 1980 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 DENND3A2RUS2 1198 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 ANKRD62A6NC57 917 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 DGAT1O75907 488 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 CELF2O95319 508 aaKnown RBP23.53■■□□□ 1.36
NPAS1-202ENST00000449844 ADRB2P07550 413 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 XKR3Q5GH77 459 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 SND1Q7KZF4 910 aaKnown RBP eCLIP23.53■■□□□ 1.36
NPAS1-202ENST00000449844 DAAM2Q86T65 1068 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 NT5DC3Q86UY8 548 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 ZSWIM2Q8NEG5 633 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 CAVIN3Q969G5 261 aa23.53■■□□□ 1.36
NPAS1-202ENST00000449844 CALR3Q96L12 384 aaKnown RBP23.53■■□□□ 1.36
NPAS1-202ENST00000449844 BTBD19C9JJ37 291 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms