RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TNFSF13BQ9Y275 285 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 MROH7Q68CQ1 1323 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 A0A0B4J269 797 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 A0A1B0GTH6 734 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 TTLL13PA6NNM8 815 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 B4GALT4O60513 344 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 TFRCP02786 760 aaKnown RBP21.06■□□□□ 0.96
RPS28-202ENST00000449223 PSMC2P35998 433 aaKnown RBP21.06■□□□□ 0.96
RPS28-202ENST00000449223 TMEM62Q0P6H9 643 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 PRPF4BQ13523 1007 aaKnown RBP21.06■□□□□ 0.96
RPS28-202ENST00000449223 HSP90AA2PQ14568 343 aaPredicted RBP21.06■□□□□ 0.96
RPS28-202ENST00000449223 FAM26DQ5JW98 314 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 TRIM59Q8IWR1 403 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 FAM126BQ8IXS8 530 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 MRFAP1L1Q96HT8 127 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 OSMRQ99650 979 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 SENP6Q9GZR1 1112 aaPredicted RBP21.06■□□□□ 0.96
RPS28-202ENST00000449223 FRMD4BQ9Y2L6 1034 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 TRPV2Q9Y5S1 764 aa21.06■□□□□ 0.96
RPS28-202ENST00000449223 KIAA0100Q14667 2235 aaKnown RBP21.06■□□□□ 0.96
RPS28-202ENST00000449223 M0QZ92 97 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 TSPAN1O60635 241 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 SERPINC1P01008 464 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 CD4P01730 458 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 EPB41P11171 864 aaKnown RBP21.05■□□□□ 0.96
RPS28-202ENST00000449223 CASP4P49662 377 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 ENPEPQ07075 957 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 MCL1Q07820 350 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 ATF7IP2Q5U623 682 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 TMEM40Q8WWA1 233 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 POMGNT1Q8WZA1 660 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 PPP1R16BQ96T49 567 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 MCOLN1Q9GZU1 580 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 KIAA1586Q9HCI6 787 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 NOD1Q9Y239 953 aa21.05■□□□□ 0.96
RPS28-202ENST00000449223 EXOC3O60645 756 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 SFPQP23246 707 aaKnown RBP eCLIP21.04■□□□□ 0.96
RPS28-202ENST00000449223 AXLP30530 894 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 CYP2J2P51589 502 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 ZNF75DP51815 510 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 UBASH3AP57075 661 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 PPP2R3AQ06190 1150 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 MPZL3Q6UWV2 235 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 ANKRD33Q7Z3H0 272 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 TUBGCP2Q9BSJ2 902 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 TRIM5Q9C035 493 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 HAPLN2Q9GZV7 340 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 TRPV6Q9H1D0 765 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 CDY2AQ9Y6F7 541 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 SQORQ9Y6N5 450 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 CLDN3O15551 220 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 B4GALT5O43286 388 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 CBFA2T2O43439 604 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 FAM189A1O60320 539 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 ERLIN2O94905 339 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 ADCY5O95622 1261 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 LDHAP00338 332 aaKnown RBP21.04■□□□□ 0.96
RPS28-202ENST00000449223 CHRNA1P02708 482 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 ARF4P18085 180 aaPredicted RBP21.04■□□□□ 0.96
RPS28-202ENST00000449223 COPB1P53618 953 aaKnown RBP21.04■□□□□ 0.96
RPS28-202ENST00000449223 MAN2A1Q16706 1144 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 FAM186BQ8IYM0 893 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 GPD1LQ8N335 351 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 CAGE1Q8TC20 777 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 NAP1L5Q96NT1 182 aaPredicted RBP21.04■□□□□ 0.96
RPS28-202ENST00000449223 XPO4Q9C0E2 1151 aaKnown RBP21.04■□□□□ 0.96
RPS28-202ENST00000449223 IFNKQ9P0W0 207 aa21.04■□□□□ 0.96
RPS28-202ENST00000449223 ARMCX3Q9UH62 379 aaPredicted RBP21.04■□□□□ 0.96
RPS28-202ENST00000449223 A0A1B0GUA9 196 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 EXTL3O43909 919 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 CSDE1O75534 798 aaKnown RBP21.03■□□□□ 0.96
RPS28-202ENST00000449223 PLCB2Q00722 1185 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 NR1I3Q14994 352 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 CCDC40Q4G0X9 1142 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 MIIPQ5JXC2 388 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 CEP135Q66GS9 1140 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 SLC39A5Q6ZMH5 540 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 INTS8Q75QN2 995 aaKnown RBP21.03■□□□□ 0.96
RPS28-202ENST00000449223 ANP32BQ92688 251 aaKnown RBP21.03■□□□□ 0.96
RPS28-202ENST00000449223 PDLIM2Q96JY6 352 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 ZBTB45Q96K62 511 aaPredicted RBP21.03■□□□□ 0.96
RPS28-202ENST00000449223 TOX2Q96NM4 488 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 PCIF1Q9H4Z3 704 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 RTN4Q9NQC3 1192 aaKnown RBP21.03■□□□□ 0.96
RPS28-202ENST00000449223 AGPAT5Q9NUQ2 364 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 INTS13Q9NVM9 706 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 AGO2Q9UKV8 859 aaKnown RBP21.03■□□□□ 0.96
RPS28-202ENST00000449223 GINS2Q9Y248 185 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 USP20Q9Y2K6 914 aa21.03■□□□□ 0.96
RPS28-202ENST00000449223 TPM3P06753 285 aa21.02■□□□□ 0.96
RPS28-202ENST00000449223 PRKCSHP14314 528 aaPredicted RBP21.02■□□□□ 0.96
RPS28-202ENST00000449223 CDC25BP30305 580 aa21.02■□□□□ 0.96
RPS28-202ENST00000449223 HOXA11P31270 313 aaPredicted RBP21.02■□□□□ 0.96
RPS28-202ENST00000449223 THPOP40225 353 aa21.02■□□□□ 0.96
RPS28-202ENST00000449223 MTIF2P46199 727 aaKnown RBP21.02■□□□□ 0.96
RPS28-202ENST00000449223 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.96
RPS28-202ENST00000449223 SNRNP35Q16560 246 aaKnown RBP21.02■□□□□ 0.96
RPS28-202ENST00000449223 FILIP1LQ4L180 1135 aa21.02■□□□□ 0.96
RPS28-202ENST00000449223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.02■□□□□ 0.96
RPS28-202ENST00000449223 PDZD7Q9H5P4 517 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms