RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RNF149Q8NC42 400 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 CNNM3Q8NE01 707 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 ETNPPLQ8TBG4 499 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 GAD1Q99259 594 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 MARCH5Q9NX47 278 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 SIT1Q9Y3P8 196 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 SNX14Q9Y5W7 946 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 SPTBN4Q9H254 2564 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 EML1O00423 815 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 RPS6KB1P23443 525 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 PDIA3P30101 505 aaKnown RBP20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 HOXA11P31270 313 aaPredicted RBP20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 MLH1P40692 756 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 INF2Q27J81 1249 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 COLGALT2Q8IYK4 626 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 NXPE3Q969Y0 559 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 EPS15L1Q9UBC2 864 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 IPPQ9Y573 584 aa20.12■□□□□ 0.81
CHCHD3-203ENST00000448878 NID2Q14112 1375 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 ARL5CA6NH57 179 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 CPLX1O14810 134 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 P4HBP07237 508 aaKnown RBP20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 RFC5P40937 340 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 SCNN1GP51170 649 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 KIAA0319Q5VV43 1072 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 ZC3H14Q6PJT7 736 aaKnown RBP20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 DGLUCYQ7Z3D6 616 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 SMG8Q8ND04 991 aaKnown RBP20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 TCP11Q8WWU5 503 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 RMDN1Q96DB5 314 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 CPB2Q96IY4 423 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 B3GALT6Q96L58 329 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 COLEC11Q9BWP8 271 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 EIF2AQ9BY44 585 aaKnown RBP20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 TRIM6Q9C030 488 aaPredicted RBP20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 RNF39Q9H2S5 420 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 HES2Q9Y543 173 aa20.11■□□□□ 0.81
CHCHD3-203ENST00000448878 F8W810 466 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 ASAP2O43150 1006 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 SLC37A4O43826 429 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 LAMP2P13473 410 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 PSMA5P28066 241 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 XKR9Q5GH70 373 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 DCLRE1AQ6PJP8 1040 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 OTUD6AQ7L8S5 288 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 NT5C3AQ9H0P0 336 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 PLEKHA4Q9H4M7 779 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 DHX33Q9H6R0 707 aaKnown RBP20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 RXFP1Q9HBX9 757 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 ARHGEF3Q9NR81 526 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 MIOSQ9NXC5 875 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 FAM186AA6NE01 2351 aa20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 RIF1Q5UIP0 2472 aaKnown RBP20.1■□□□□ 0.81
CHCHD3-203ENST00000448878 INO80B-WBP1J3KQ70 363 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 DEXIO95424 95 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 DSG1Q02413 1049 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 EMC2Q15006 297 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 NOTUMQ6P988 496 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 MOXD1Q6UVY6 613 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 ZNF707Q96C28 371 aaPredicted RBP20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 ZFP42Q96MM3 310 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 MTRQ99707 1265 aa20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 WRAP73Q9P2S5 460 aaPredicted RBP20.09■□□□□ 0.81
CHCHD3-203ENST00000448878 DMDP11532 3685 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 TGM5O43548 720 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 SP9P0CG40 484 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 RPL17P18621 184 aaKnown RBP20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 YWHABP31946 246 aaKnown RBP20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 HSPA4P34932 840 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 PPP2R5CQ13362 524 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 USP41Q3LFD5 358 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 NCAPH2Q6IBW4 605 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 PHLDB3Q6NSJ2 640 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 KRT25Q7Z3Z0 450 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 C1orf210Q8IVY1 113 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 HACE1Q8IYU2 909 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 HDAC7Q8WUI4 952 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 RABGGTAQ92696 567 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 MBOAT7Q96N66 472 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 LARP6Q9BRS8 491 aaKnown RBP20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 PRKD2Q9BZL6 878 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 PPME1Q9Y570 386 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 NUMBLQ9Y6R0 609 aa20.08■□□□□ 0.81
CHCHD3-203ENST00000448878 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 MED19A0JLT2 244 aaPredicted RBP20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 TADA2AO75478 443 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 AKAP5P24588 427 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 AXLP30530 894 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 STK3Q13188 491 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 CTTNQ14247 550 aaKnown RBP20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 FUT10Q6P4F1 479 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 FBXL16Q8N461 479 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 DCLK2Q8N568 766 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 KCNB2Q92953 911 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 DYDC2Q96IM9 177 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 FAM20AQ96MK3 541 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 AIFM3Q96NN9 605 aa20.07■□□□□ 0.8
CHCHD3-203ENST00000448878 LXNQ9BS40 222 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms