RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FAM162AQ96A26 154 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PPCSQ9HAB8 311 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PRDM5Q9NQX1 630 aaPredicted RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 SH3BP4Q9P0V3 963 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 DYRK3O43781 588 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 GSTA3Q16772 222 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ZNF394Q53GI3 561 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 TSPAN17Q96FV3 270 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 HDAC6Q9UBN7 1215 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 LOC102724159A0A0B4J2E5 919 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 LRRIQ4A6NIV6 560 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PWP2Q15269 919 aaKnown RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 MACC1Q6ZN28 852 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 TRPC4Q9UBN4 977 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 WDR17Q8IZU2 1322 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 HNRNPDLO14979 420 aaKnown RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 KITP10721 976 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 FNTAP49354 379 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ORC2Q13416 577 aaPredicted RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ASIC4Q96FT7 647 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 SLC25A13Q9UJS0 675 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 CAMK1Q14012 370 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PLEKHA7Q6IQ23 1121 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 MAGEA2P43356 314 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 CASP4P49662 377 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 NANOGNBQ7Z5D8 188 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 DIS3L2Q8IYB7 885 aaKnown RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 CYP4Z2PQ8N1L4 340 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 UXS1Q8NBZ7 420 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 FAM172AQ8WUF8 416 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 DESI2Q9BSY9 194 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 CIDEBQ9UHD4 219 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 LRFN2Q9ULH4 789 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 GOLGA8SH3BPF8 625 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 RTN3O95197 1032 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ARL4DP49703 201 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 PPP2R2AP63151 447 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 SMCO1Q147U7 214 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 CDC73Q6P1J9 531 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 DCUN1D1Q96GG9 259 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ACAD9Q9H845 621 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 RAPGEF2Q9Y4G8 1499 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 TNPO2O14787 897 aaKnown RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 YWHAZP63104 245 aaKnown RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 RHAGQ02094 409 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 IFNL2Q8IZJ0 200 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 KCNV2Q8TDN2 545 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 TNIP3Q96KP6 325 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 USP44Q9H0E7 712 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 TMEM206Q9H813 350 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 DCTN4Q9UJW0 460 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 IQSEC3Q9UPP2 1182 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 NSD3Q9BZ95 1437 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 BTN3A3O00478 584 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 P4HA2O15460 535 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 OLR1P78380 273 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 TFDP2Q14188 446 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 AS3MTQ9HBK9 375 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 MAN1C1Q9NR34 630 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 TRPM5Q9NZQ8 1165 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 MIF4GDA9UHW6 222 aaKnown RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ZNF862O60290 1169 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 TAB3Q8N5C8 712 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ADAM21Q9UKJ8 722 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 SSTP61278 116 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 SLC9A7Q96T83 725 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 PI4K2BG5E9Z4 385 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ALDH1A2O94788 518 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 CFBP00751 764 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 HIST1H2AGP0C0S8 130 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 HIST1H2ADP20671 130 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 YY1P25490 414 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 DYNLT1P63172 113 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ICA1Q05084 483 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 MZT2BQ6NZ67 158 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ASAP3Q8TDY4 903 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 HIST1H2AHQ96KK5 128 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 HIST1H2AJQ99878 128 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 H2AFJQ9BTM1 129 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 OXCT2Q9BYC2 517 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 VPS11Q9H270 941 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 ANKRD50Q9ULJ7 1429 aa9.42□□□□□ -0.9
NIPBL-202ENST00000448238 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-202ENST00000448238 UBE2QL1A1L167 161 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 ALCAMQ13740 583 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 MPP2Q14168 576 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 NFIL3Q16649 462 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 ZCWPW2Q504Y3 356 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CHST3Q7LGC8 479 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 DHTKD1Q96HY7 919 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CNDP1Q96KN2 507 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 MOV10L1Q9BXT6 1211 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 ARMC7Q9H6L4 198 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 SPACA6W5XKT8 324 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 KIF21BO75037 1637 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 GNB5O14775 395 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 QARSP47897 775 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms