RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SLC27A1Q6PCB7 646 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 TAS1R3Q7RTX0 852 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 THNSL1Q8IYQ7 743 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 SLC17A8Q8NDX2 589 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 SPPL3Q8TCT6 385 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 P2RX5Q93086 422 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 TRIM6Q9C030 488 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-204ENST00000446876 TBC1D13Q9NVG8 400 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 LMCD1Q9NZU5 365 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 ARHGAP28Q9P2N2 729 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 CCDC39Q9UFE4 941 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 PCDHB12Q9Y5F1 795 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 PHLPP2Q6ZVD8 1323 aa16.35■□□□□ 0.21
HDAC4-204ENST00000446876 K7ERI5 159 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 PPP6R2O75170 966 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
HDAC4-204ENST00000446876 PLS3P13797 630 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 AKAP5P24588 427 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 MLH1P40692 756 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 EFNA5P52803 228 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 RRAGBQ5VZM2 374 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 KCNT2Q6UVM3 1135 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
HDAC4-204ENST00000446876 PDILTQ8N807 584 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 POF1BQ8WVV4 589 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 GAD1Q99259 594 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 MRPL9Q9BYD2 267 aaKnown RBP16.34■□□□□ 0.21
HDAC4-204ENST00000446876 GBP3Q9H0R5 595 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 AAASQ9NRG9 546 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 KCND2Q9NZV8 630 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
HDAC4-204ENST00000446876 NT5C1B-RDH14C9J2C7 533 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 N4BP3O15049 544 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 ZC3H11AO75152 810 aaKnown RBP eCLIP16.33■□□□□ 0.2
HDAC4-204ENST00000446876 FGF18O76093 207 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 FAM13AO94988 1023 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 POMCP01189 267 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 IRS1P35568 1242 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 DDIT3P35638 169 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 BCAR1P56945 870 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 GIT2Q14161 759 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 TCEAL5Q5H9L2 206 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 ATF7IP2Q5U623 682 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 SHC4Q6S5L8 630 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 ZNF280BQ86YH2 543 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 CNNM3Q8NE01 707 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 URGCPQ8TCY9 931 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 ZFP42Q96MM3 310 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 ZNF558Q96NG5 402 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 LMAN2LQ9H0V9 348 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 ZHX3Q9H4I2 956 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 NRDE2Q9H7Z3 1164 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 KLK14Q9P0G3 267 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 DNAJB4Q9UDY4 337 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 STK17AQ9UEE5 414 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 TRIP11Q15643 1979 aa16.33■□□□□ 0.2
HDAC4-204ENST00000446876 ARL5CA6NH57 179 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 CUTAO60888 179 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 DDHD2O94830 711 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 STAT6P42226 847 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 SCNN1GP51170 649 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 RNASELQ05823 741 aaKnown RBP16.32■□□□□ 0.2
HDAC4-204ENST00000446876 TIGD5Q53EQ6 642 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 AXDND1Q5T1B0 1012 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-204ENST00000446876 DYMQ7RTS9 669 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 TMEM173Q86WV6 379 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-204ENST00000446876 TMEM161BQ8NDZ6 487 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 SPIRE2Q8WWL2 714 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 TARS2Q9BW92 718 aaKnown RBP16.32■□□□□ 0.2
HDAC4-204ENST00000446876 TMEM134Q9H6X4 195 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 C17orf75Q9HAS0 396 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 MIOSQ9NXC5 875 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 SNTG2Q9NY99 539 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 ODF2LQ9ULJ1 636 aa16.32■□□□□ 0.2
HDAC4-204ENST00000446876 MYMKA6NI61 221 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 ME1P48163 572 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 CCDC73Q6ZRK6 1079 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 SLC39A11Q8N1S5 342 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 BCL7CQ8WUZ0 217 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 ACO2Q99798 780 aaKnown RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 ADPGKQ9BRR6 497 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 NSUN3Q9H649 340 aaKnown RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 THEGQ9P2T0 379 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 RBM19Q9Y4C8 960 aaKnown RBP16.31■□□□□ 0.2
HDAC4-204ENST00000446876 BRWD1Q9NSI6 2320 aa16.31■□□□□ 0.2
HDAC4-204ENST00000446876 K7ENM7 598 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 GTF2F1P35269 517 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDAC4-204ENST00000446876 SLC11A1P49279 550 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 ZNF131P52739 623 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 SMTNP53814 917 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 NCKAP1LP55160 1127 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms