RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 UBN1Q9NPG3 1134 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 DDX19AQ9NUU7 478 aaKnown RBP20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 KANSL3Q9P2N6 904 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 HES2Q9Y543 173 aa20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.95■□□□□ 0.94
HMGB3P22-201ENST00000442010 C2orf71A6NGG8 1288 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 H3BQV1 296 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 CDC25AP30304 524 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 RNASELQ05823 741 aaKnown RBP20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 NCBP1Q09161 790 aaKnown RBP20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 DTHD1Q6ZMT9 781 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 TMC7Q7Z402 723 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 DDX53Q86TM3 631 aaKnown RBP20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 CDR2LQ86X02 465 aaPredicted RBP20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 ADHFE1Q8IWW8 467 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 TMEM175Q9BSA9 504 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 VN1R3Q9BXE9 311 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 CCDC113Q9H0I3 377 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 GBP3Q9H0R5 595 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 MIOSQ9NXC5 875 aa20.94■□□□□ 0.94
HMGB3P22-201ENST00000442010 ARL5CA6NH57 179 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 TTLL13PA6NNM8 815 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 POMCP01189 267 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 NAMPTP43490 491 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 SMC1AQ14683 1233 aaKnown RBP20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 KRT79Q5XKE5 535 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 LARP1BQ659C4 914 aaKnown RBP20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 SLC27A1Q6PCB7 646 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 VPS52Q8N1B4 723 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 GSTCDQ8NEC7 633 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 GAD1Q99259 594 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 NXF3Q9H4D5 531 aaKnown RBP20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 POLD4Q9HCU8 107 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 PRMT7Q9NVM4 692 aaPredicted RBP20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 IRAK3Q9Y616 596 aa20.93■□□□□ 0.94
HMGB3P22-201ENST00000442010 E9PMD0 336 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 EDN1P05305 212 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 CTSAP10619 480 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 DSC1Q08554 894 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 KCNK18Q7Z418 384 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 ZBTB8OSQ8IWT0 167 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 COLGALT2Q8IYK4 626 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 C2orf40Q9H1Z8 148 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 GIT1Q9Y2X7 761 aa20.92■□□□□ 0.94
HMGB3P22-201ENST00000442010 PI4K2BG5E9Z4 385 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 NPTXRO95502 500 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 ALDH2P05091 517 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 MLH1P40692 756 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 HYIQ5T013 277 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 ARL6IP4Q66PJ3 421 aaKnown RBP20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 KIFAP3Q92845 792 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 ZFP42Q96MM3 310 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 S1PR5Q9H228 398 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 ZMYM2Q9UBW7 1377 aa20.91■□□□□ 0.94
HMGB3P22-201ENST00000442010 ACKR2O00590 384 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 NRP1O14786 923 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 CLASP2O75122 1294 aaKnown RBP20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 CXCL14O95715 111 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 EFEMP2O95967 443 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 SSTR3P32745 418 aaPredicted RBP20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 SCNN1GP51170 649 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 PPP2R5AQ15172 486 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 MAPK6Q16659 721 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 ANKRD54Q6NXT1 300 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 SYCE2Q6PIF2 218 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 DAW1Q8N136 415 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 AUTS2Q8WXX7 1259 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 SUSD6Q92537 303 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 PNMA5Q96PV4 448 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 FAM193BQ96PV7 902 aaPredicted RBP20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 KIFC3Q9BVG8 833 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 APOL6Q9BWW8 343 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 TRIM6Q9C030 488 aaPredicted RBP20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 PDZD7Q9H5P4 517 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 MARCH5Q9NX47 278 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 DNM3Q9UQ16 869 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 FAN1Q9Y2M0 1017 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 USP15Q9Y4E8 981 aaPredicted RBP20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 HCFC2Q9Y5Z7 792 aa20.9■□□□□ 0.94
HMGB3P22-201ENST00000442010 PRKCBP05771 671 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 AKAP5P24588 427 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 RINT1Q6NUQ1 792 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 C1orf186Q6ZWK4 172 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 DEPTORQ8TB45 409 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 RUSC1Q9BVN2 902 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 C1QTNF1Q9BXJ1 281 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 USP20Q9Y2K6 914 aa20.89■□□□□ 0.93
HMGB3P22-201ENST00000442010 MTCL1Q9Y4B5 1905 aaKnown RBP20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 VWA3AA6NCI4 1184 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 LILRB3O75022 631 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 MAPK7Q13164 816 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 PRPF4BQ13523 1007 aaKnown RBP20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 GIT2Q14161 759 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 PTPN14Q15678 1187 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 LLGL2Q6P1M3 1020 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 HACE1Q8IYU2 909 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 RNF168Q8IYW5 571 aaPredicted RBP20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 IFT74Q96LB3 600 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 C11orf16Q9NQ32 467 aa20.88■□□□□ 0.93
HMGB3P22-201ENST00000442010 CITO14578 2027 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms