RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 MOCS3O95396 460 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 FAM228BP0C875 321 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 TEX35Q5T0J7 233 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 FOXR2Q6PJQ5 311 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 TAS1R3Q7RTX0 852 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 ABHD16BQ9H3Z7 469 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 ZFYVE28Q9HCC9 887 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 ACP6Q9NPH0 428 aa16.34■□□□□ 0.21
CPSF7-205ENST00000439958 RBAKQ9NYW8 714 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-205ENST00000439958 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
CPSF7-205ENST00000439958 ZNF263O14978 683 aa16.33■□□□□ 0.21
CPSF7-205ENST00000439958 PRKCBP05771 671 aa16.33■□□□□ 0.21
CPSF7-205ENST00000439958 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.21
CPSF7-205ENST00000439958 VPS36Q86VN1 386 aa16.33■□□□□ 0.21
CPSF7-205ENST00000439958 IQCDQ96DY2 449 aa16.33■□□□□ 0.21
CPSF7-205ENST00000439958 SETD4Q9NVD3 440 aa16.33■□□□□ 0.21
CPSF7-205ENST00000439958 MORF4L1Q9UBU8 362 aa16.33■□□□□ 0.21
CPSF7-205ENST00000439958 H0YCG3 227 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 HBP1O60381 514 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 SLU7O95391 586 aaKnown RBP16.33■□□□□ 0.2
CPSF7-205ENST00000439958 TBC1D8O95759 1140 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 PPFIA1Q13136 1202 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 USP37Q86T82 979 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 ZC3H3Q8IXZ2 948 aaKnown RBP16.33■□□□□ 0.2
CPSF7-205ENST00000439958 CAGE1Q8TC20 777 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 TAS1R2Q8TE23 839 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
CPSF7-205ENST00000439958 ZBTB9Q96C00 473 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 STRA6Q9BX79 667 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 TMEM117Q9H0C3 514 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 ARHGAP28Q9P2N2 729 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 B4GALT5O43286 388 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 MAFO75444 373 aaPredicted RBP16.33■□□□□ 0.2
CPSF7-205ENST00000439958 MYL3P08590 195 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 FGFR4P22455 802 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 GRB14Q14449 540 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 IFNL1Q8IU54 200 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 PACSIN1Q9BY11 444 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 NIFKQ9BYG3 293 aaKnown RBP16.33■□□□□ 0.2
CPSF7-205ENST00000439958 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.2
CPSF7-205ENST00000439958 EIF3CLB5ME19 914 aaKnown RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 EVI5O60447 810 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 SRGAP2O75044 1071 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 GLYCTKQ8IVS8 523 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 ARHGEF19Q8IW93 802 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 BORCS6Q96GS4 357 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 EIF3CQ99613 913 aaKnown RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 LRRIQ3A6PVS8 624 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 MYCP01106 439 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 LUC7LQ9NQ29 371 aaKnown RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 A0A087WZ62 844 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 IGKV6D-21A0A0A0MT36 114 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 CALCAP01258 141 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 SSTR3P32745 418 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 ARHGAP25P42331 645 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 ZNF568Q3ZCX4 644 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 IER5Q5VY09 327 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 PHLDB3Q6NSJ2 640 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 TCP11Q8WWU5 503 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 FDXACB1Q9BRP7 624 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-205ENST00000439958 PDLIM7Q9NR12 457 aa16.32■□□□□ 0.2
CPSF7-205ENST00000439958 FOXN3O00409 490 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ADCY3O60266 1144 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ARL2P36404 184 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 VAV2P52735 878 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 MAP2K5Q13163 448 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ELF2Q15723 593 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 SLC9A9Q8IVB4 645 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 PARD3BQ8TEW8 1205 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 FLRT1Q9NZU1 646 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 SLC45A1Q9Y2W3 748 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 EDN1P05305 212 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 KRT19P08727 400 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 C6orf222P0C671 652 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 TMOD1P28289 359 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 CXCR5P32302 372 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 TNFSF9P41273 254 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 KIZQ2M2Z5 673 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ERCC6LQ2NKX8 1250 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 KRT39Q6A163 491 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 SV2AQ7L0J3 742 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 CEP120Q8N960 986 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 MAP7D2Q96T17 732 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 PHLPP2Q6ZVD8 1323 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 ADCY6O43306 1168 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 CYP24A1Q07973 514 aa16.31■□□□□ 0.2
CPSF7-205ENST00000439958 PRPF4BQ13523 1007 aaKnown RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 MXD4Q14582 209 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-205ENST00000439958 DGKDQ16760 1214 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms