RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 KCNK18Q7Z418 384 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 TMEM87AQ8NBN3 555 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 SMG8Q8ND04 991 aaKnown RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 SPIRE2Q8WWL2 714 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 BSNDQ8WZ55 320 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 RPS6KC1Q96S38 1066 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 CDCA3Q99618 268 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 NTPCRQ9BSD7 190 aaKnown RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 APOL6Q9BWW8 343 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 EIF2AQ9BY44 585 aaKnown RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 GBP3Q9H0R5 595 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 IGFLR1Q9H665 355 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 UBE2ZQ9H832 354 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 POLD4Q9HCU8 107 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 ODF2LQ9ULJ1 636 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 FAM50BQ9Y247 325 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 MORC2Q9Y6X9 1032 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 MEIS3P2A8K0S8 358 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 NT5C1B-RDH14C9J2C7 533 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 B4GALT5O43286 388 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 CSPG5O95196 566 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 POMCP01189 267 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 ZSCAN22P10073 491 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-216ENST00000439475 PLS3P13797 630 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 SCP2P22307 547 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 ABCD1P33897 745 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 GIT2Q14161 759 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 BECN1Q14457 450 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.57
MCF2L-216ENST00000439475 DCAF4L1Q3SXM0 396 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 ATF7IP2Q5U623 682 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 RRAGBQ5VZM2 374 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 ATL3Q6DD88 541 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 CCDC73Q6ZRK6 1079 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 CDR2LQ86X02 465 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-216ENST00000439475 KRI1Q8N9T8 703 aaKnown RBP11.52□□□□□ -0.57
MCF2L-216ENST00000439475 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 GAD1Q99259 594 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 TCHPQ9BT92 498 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 RUSC1Q9BVN2 902 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 MRPL4Q9BYD3 311 aaKnown RBP11.52□□□□□ -0.57
MCF2L-216ENST00000439475 TLE6Q9H808 572 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 ENTPD7Q9NQZ7 604 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 CLDND1Q9NY35 253 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 CFAP45Q9UL16 551 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 MYH11P35749 1972 aa11.52□□□□□ -0.57
MCF2L-216ENST00000439475 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 SPTLC2O15270 562 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 PPP6R2O75170 966 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 FAM13AO94988 1023 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 YEATS4O95619 227 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 F13A1P00488 732 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 SRGAP2BP0DMP2 458 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 PLCG1P19174 1290 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 KCNA5P22460 613 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 AKAP5P24588 427 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 DNAJB1P25685 340 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 CA8P35219 290 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 IRS1P35568 1242 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 MLH1P40692 756 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 OR1G1P47890 313 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 NASPP49321 788 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-216ENST00000439475 ERVFC1P60507 584 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 TFF2Q03403 129 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 GRIN1Q05586 938 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 RAD51AP2Q09MP3 1159 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 CAMK1Q14012 370 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 SMC1AQ14683 1233 aaKnown RBP11.51□□□□□ -0.57
MCF2L-216ENST00000439475 LEXMQ3ZCV2 418 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 GPBP1Q86WP2 473 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 LARP4BQ92615 738 aaKnown RBP11.51□□□□□ -0.57
MCF2L-216ENST00000439475 RAD54LQ92698 747 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 IGSF21Q96ID5 467 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 TCF25Q9BQ70 676 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 KIFC3Q9BVG8 833 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 CCDC113Q9H0I3 377 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 ZHX3Q9H4I2 956 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 ARHGAP28Q9P2N2 729 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 TFIP11Q9UBB9 837 aaKnown RBP11.51□□□□□ -0.57
MCF2L-216ENST00000439475 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 FBXO2Q9UK22 296 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-216ENST00000439475 TNFSF13BQ9Y275 285 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 SSX2IPQ9Y2D8 614 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 HES2Q9Y543 173 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 ZMYM2Q9UBW7 1377 aa11.51□□□□□ -0.57
MCF2L-216ENST00000439475 ARL5CA6NH57 179 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 NRP1O14786 923 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 INPPL1O15357 1258 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 SLC16A4O15374 487 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 TBCAO75347 108 aaKnown RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 DDHD2O94830 711 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 CXCL14O95715 111 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 BMP1P13497 986 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 PBX3P40426 434 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 NRIP1P48552 1158 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms