RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 GAD1Q99259 594 aa15.32■□□□□ 0.04
PRAME-209ENST00000439106 PLIN2Q99541 437 aa15.32■□□□□ 0.04
PRAME-209ENST00000439106 NFKBIZQ9BYH8 718 aa15.32■□□□□ 0.04
PRAME-209ENST00000439106 BACH2Q9BYV9 841 aa15.32■□□□□ 0.04
PRAME-209ENST00000439106 TRIM6Q9C030 488 aaPredicted RBP15.32■□□□□ 0.04
PRAME-209ENST00000439106 MIOSQ9NXC5 875 aa15.32■□□□□ 0.04
PRAME-209ENST00000439106 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.32■□□□□ 0.04
PRAME-209ENST00000439106 CNTNAP2Q9UHC6 1331 aa15.32■□□□□ 0.04
PRAME-209ENST00000439106 VWA3AA6NCI4 1184 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 F8W810 466 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 SSBP05455 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRAME-209ENST00000439106 PRPHP41219 470 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 ZP2Q05996 745 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 SMAD4Q13485 552 aaKnown RBP15.31■□□□□ 0.04
PRAME-209ENST00000439106 PDIA5Q14554 519 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 SMAD2Q15796 467 aaKnown RBP15.31■□□□□ 0.04
PRAME-209ENST00000439106 PUS10Q3MIT2 529 aaKnown RBP15.31■□□□□ 0.04
PRAME-209ENST00000439106 KRT79Q5XKE5 535 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 ZBTB8OSQ8IWT0 167 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 GJD3Q8N144 294 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 VPS52Q8N1B4 723 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 FAM193BQ96PV7 902 aaPredicted RBP15.31■□□□□ 0.04
PRAME-209ENST00000439106 RUSC1Q9BVN2 902 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 ZBP1Q9H171 429 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 CACNG4Q9UBN1 327 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 CDH22Q9UJ99 828 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 PRG3Q9Y2Y8 225 aaPredicted RBP15.31■□□□□ 0.04
PRAME-209ENST00000439106 DENND4AQ7Z401 1863 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 DOCK6Q96HP0 2047 aa15.31■□□□□ 0.04
PRAME-209ENST00000439106 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.3■□□□□ 0.04
PRAME-209ENST00000439106 VPS37CA5D8V6 355 aaPredicted RBP15.3■□□□□ 0.04
PRAME-209ENST00000439106 C2orf71A6NGG8 1288 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 ARL5CA6NH57 179 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 LAD1O00515 517 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 PRKCBP05771 671 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 MUTP22033 750 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 NCBP1Q09161 790 aaKnown RBP15.3■□□□□ 0.04
PRAME-209ENST00000439106 SMC1AQ14683 1233 aaKnown RBP15.3■□□□□ 0.04
PRAME-209ENST00000439106 PCBP1Q15365 356 aaKnown RBP eCLIP15.3■□□□□ 0.042e-10■■■□□ 18.2
PRAME-209ENST00000439106 SLC27A1Q6PCB7 646 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 SMRP1Q8NCR6 262 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 CCDC51Q96ER9 411 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 PNMA5Q96PV4 448 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 RAB34Q9BZG1 259 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 CCDC113Q9H0I3 377 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 FZD8Q9H461 694 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 PDZD7Q9H5P4 517 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 NGRNQ9NPE2 291 aaKnown RBP15.3■□□□□ 0.04
PRAME-209ENST00000439106 MARCH5Q9NX47 278 aa15.3■□□□□ 0.04
PRAME-209ENST00000439106 A0A1B0GUA9 196 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 FAM86C2PA6NEL3 165 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 NRP1O14786 923 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 EYA4O95677 639 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 NAMPTP43490 491 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 GRIN1Q05586 938 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 RAD51AP2Q09MP3 1159 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 COASYQ13057 564 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 CUL4AQ13619 759 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 KCNC3Q14003 757 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 TMEM132AQ24JP5 1023 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 EEF1DP3Q658K8 133 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 PDE12Q6L8Q7 609 aaKnown RBP15.29■□□□□ 0.04
PRAME-209ENST00000439106 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 DDX53Q86TM3 631 aaKnown RBP15.29■□□□□ 0.04
PRAME-209ENST00000439106 DAW1Q8N136 415 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 CNNM3Q8NE01 707 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 CXCL16Q9H2A7 254 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 PRMT7Q9NVM4 692 aaPredicted RBP15.29■□□□□ 0.04
PRAME-209ENST00000439106 PARP2Q9UGN5 583 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 RAPGEFL1Q9UHV5 662 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 USP15Q9Y4E8 981 aaPredicted RBP15.29■□□□□ 0.04
PRAME-209ENST00000439106 HCFC2Q9Y5Z7 792 aa15.29■□□□□ 0.04
PRAME-209ENST00000439106 CLASP2O75122 1294 aaKnown RBP15.28■□□□□ 0.04
PRAME-209ENST00000439106 HIP1RO75146 1068 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 CXCL14O95715 111 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 OR1G1P47890 313 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 MAPK7Q13164 816 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
PRAME-209ENST00000439106 MAPK6Q16659 721 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 ANKRD54Q6NXT1 300 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 ADHFE1Q8IWW8 467 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 COLGALT2Q8IYK4 626 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 MRPL43Q8N983 215 aaKnown RBP15.28■□□□□ 0.04
PRAME-209ENST00000439106 GSTCDQ8NEC7 633 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 FEZF2Q8TBJ5 459 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 PRIMPOLQ96LW4 560 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 CDCA3Q99618 268 aaPredicted RBP15.28■□□□□ 0.04
PRAME-209ENST00000439106 C2orf40Q9H1Z8 148 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 DNM3Q9UQ16 869 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 FAN1Q9Y2M0 1017 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 TRIOO75962 3097 aa15.28■□□□□ 0.04
PRAME-209ENST00000439106 ANK1P16157 1881 aa15.27■□□□□ 0.04
PRAME-209ENST00000439106 TECTAO75443 2155 aa15.27■□□□□ 0.04
PRAME-209ENST00000439106 CTSAP10619 480 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms