RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FAM193BQ96PV7 902 aaPredicted RBP27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 KIFC3Q9BVG8 833 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 COL25A1Q9BXS0 654 aaPredicted RBP27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 CCSER1Q9C0I3 900 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 GIT1Q9Y2X7 761 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 RBM19Q9Y4C8 960 aaKnown RBP27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 BRWD1Q9NSI6 2320 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 K7ERI5 159 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 LIG1P18858 919 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 IRS1P35568 1242 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 COL19A1Q14993 1142 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 TMEM169Q96HH4 297 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 USP28Q96RU2 1077 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 NXF3Q9H4D5 531 aaKnown RBP27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 NRDE2Q9H7Z3 1164 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 KMT5AQ9NQR1 393 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 HES2Q9Y543 173 aa27.26■■□□□ 1.95
RAPGEF1-206ENST00000438647 PLXNA4Q9HCM2 1894 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 ZMYM2Q9UBW7 1377 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 INPPL1O15357 1258 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 KCNA5P22460 613 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 TXLNAP40222 546 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 HYAL1Q12794 435 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 MAPK7Q13164 816 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 KARSQ15046 597 aaKnown RBP27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 APBB1IPQ7Z5R6 666 aaPredicted RBP27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 CDR2LQ86X02 465 aaPredicted RBP27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 ZNF396Q96N95 335 aaPredicted RBP27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 APOL6Q9BWW8 343 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 GBP3Q9H0R5 595 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 PDZD7Q9H5P4 517 aa27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 NGRNQ9NPE2 291 aaKnown RBP27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 FBXO2Q9UK22 296 aaPredicted RBP27.25■■□□□ 1.95
RAPGEF1-206ENST00000438647 FSD2A1L4K1 749 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 ARL5CA6NH57 179 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 PLCG1P19174 1290 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 MLH1P40692 756 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 SMTNP53814 917 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 BMS1Q14692 1282 aaKnown RBP27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 SLC39A14Q15043 492 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 EP400NLQ6ZTU2 488 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 RNF39Q9H2S5 420 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 TMEM134Q9H6X4 195 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 ENTPD7Q9NQZ7 604 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 CLDND1Q9NY35 253 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 ARHGAP28Q9P2N2 729 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 CCDC39Q9UFE4 941 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 ATG2AQ2TAZ0 1938 aa27.24■■□□□ 1.95
RAPGEF1-206ENST00000438647 POMCP01189 267 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 GALTP07902 379 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 PLS3P13797 630 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 RAD51AP2Q09MP3 1159 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 SPIRE2Q8WWL2 714 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 GAD1Q99259 594 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 TCF25Q9BQ70 676 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 TMEM175Q9BSA9 504 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 LARSQ9P2J5 1176 aaKnown RBP27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 ODF2LQ9ULJ1 636 aa27.23■■□□□ 1.95
RAPGEF1-206ENST00000438647 NT5C1B-RDH14C9J2C7 533 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 NASPP49321 788 aaPredicted RBP27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 KCNQ1P51787 676 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 AFF1P51825 1210 aaKnown RBP27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 ERVFC1P60507 584 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 CTC1Q2NKJ3 1217 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 DCAF4L1Q3SXM0 396 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 LEXMQ3ZCV2 418 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 ATF7IP2Q5U623 682 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 GPBP1Q86WP2 473 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 ZNF280BQ86YH2 543 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 KRI1Q8N9T8 703 aaKnown RBP27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 RAD54LQ92698 747 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 NTPCRQ9BSD7 190 aaKnown RBP27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 IGFLR1Q9H665 355 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 BLOC1S4Q9NUP1 217 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 STK39Q9UEW8 545 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 PARP2Q9UGN5 583 aa27.22■■□□□ 1.95
RAPGEF1-206ENST00000438647 TTLL13PA6NNM8 815 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 SFI1A8K8P3 1242 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 FSCN2O14926 492 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 ALDH2P05091 517 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 ZSCAN22P10073 491 aaPredicted RBP27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 BMP1P13497 986 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 AKAP5P24588 427 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 STK38Q15208 465 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 TMC7Q7Z402 723 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 LARP4BQ92615 738 aaKnown RBP27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 IGSF21Q96ID5 467 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 EPSTI1Q96J88 318 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 ZFP42Q96MM3 310 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 RPS6KC1Q96S38 1066 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 CDCA3Q99618 268 aaPredicted RBP27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 MRPL4Q9BYD3 311 aaKnown RBP27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 TLE6Q9H808 572 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 DNAJB4Q9UDY4 337 aa27.21■■□□□ 1.95
RAPGEF1-206ENST00000438647 H0YCG3 227 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 NR1I2O75469 434 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 DDHD2O94830 711 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 NRIP1P48552 1158 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 SLC11A1P49279 550 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 SCNN1GP51170 649 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms