RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 INPP4AQ96PE3 977 aaPredicted RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 DPH5Q9H2P9 285 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 ACAD9Q9H845 621 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 LUC7LQ9NQ29 371 aaKnown RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 SART1O43290 800 aaKnown RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 GAP43P17677 238 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 TNFAIP3P21580 790 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 SP2Q02086 613 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 SF3A3Q12874 501 aaKnown RBP eCLIP10.25□□□□□ -0.77
CUX1-206ENST00000437600 BMT2Q1RMZ1 405 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 SWSAP1Q6NVH7 229 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 C2orf69Q8N8R5 385 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 USP38Q8NB14 1042 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 DHX38Q92620 1227 aaKnown RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 ZIM3Q96PE6 472 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 NEUROG2Q9H2A3 272 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 TXNRD2Q9NNW7 524 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 GABBR1Q9UBS5 961 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 COG5Q9UP83 839 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 FRMPD4Q14CM0 1322 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 GOLGA6CA6NDK9 693 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 KRIT1O00522 736 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 GOLGA6DP0CG33 693 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 MYL7Q01449 175 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 SCARA3Q6AZY7 606 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 LRRC57Q8N9N7 239 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 SLC30A5Q8TAD4 765 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 NSUN6Q8TEA1 469 aaKnown RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 GLG1Q92896 1179 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 ASCC2Q9H1I8 757 aaPredicted RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 LRRC4CQ9HCJ2 640 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 GOLGA6AQ9NYA3 693 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 HOXC10Q9NYD6 342 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 LARSQ9P2J5 1176 aaKnown RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 MCM3APO60318 1980 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 TRPM7Q96QT4 1865 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 A0A0G2JLL6 359 aaPredicted RBP10.24□□□□□ -0.77
CUX1-206ENST00000437600 CYP26A1O43174 497 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ZNF862O60290 1169 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 SGPL1O95470 568 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 FGGP02679 453 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 BCRP11274 1271 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 CCND2P30279 289 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ADSSP30520 456 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ACTN2P35609 894 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 MARCKSL1P49006 195 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ERVK-9P63128 1117 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 MOGSQ13724 837 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 SEZ6Q53EL9 994 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 DAB2IPQ5VWQ8 1189 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 LLGL2Q6P1M3 1020 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 LRRC31Q6UY01 552 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 PRRT2Q7Z6L0 340 aaPredicted RBP10.24□□□□□ -0.77
CUX1-206ENST00000437600 EGFL6Q8IUX8 553 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 GOLGA6L1Q8N7Z2 621 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 AFAP1L1Q8TED9 768 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 C12orf42Q96LP6 360 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ZIC5Q96T25 663 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 APEX2Q9UBZ4 518 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 TTI1O43156 1089 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 DAPK3O43293 454 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ZEB2O60315 1214 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 FTLP02792 175 aaPredicted RBP10.24□□□□□ -0.77
CUX1-206ENST00000437600 VAMP7P51809 220 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ZNF131P52739 623 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 HTRA3P83110 453 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 TTMPQ5BVD1 217 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ANO5Q75V66 913 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 SLC47A2Q86VL8 602 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 CCDC60Q8IWA6 550 aaPredicted RBP10.24□□□□□ -0.77
CUX1-206ENST00000437600 OLIG1Q8TAK6 271 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 LMO3Q8TAP4 145 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 SEMA4DQ92854 862 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 ZNF668Q96K58 619 aaPredicted RBP10.24□□□□□ -0.77
CUX1-206ENST00000437600 STK33Q9BYT3 514 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 DMAC2Q9NW81 257 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 GEMIN8Q9NWZ8 242 aaKnown RBP10.24□□□□□ -0.77
CUX1-206ENST00000437600 HSPBP1Q9NZL4 362 aa10.24□□□□□ -0.77
CUX1-206ENST00000437600 KIF3CO14782 793 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 TUBBP07437 444 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 ADRB2P07550 413 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 Q3C1V9 767 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 C1orf220Q5T0J3 134 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 VPS36Q86VN1 386 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 BSNDQ8WZ55 320 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 TRIM51Q9BSJ1 452 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 TBC1D22BQ9NU19 505 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 ADAMTS5Q9UNA0 930 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 NOC2LQ9Y3T9 749 aaKnown RBP10.23□□□□□ -0.77
CUX1-206ENST00000437600 KIAA1217Q5T5P2 1943 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 CCL15-CCL14A0A0B4J2E2 113 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 WDR64B1ANS9 1081 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 MYO1CO00159 1063 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 KRT13P13646 458 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 MCM3P25205 808 aa10.23□□□□□ -0.77
CUX1-206ENST00000437600 ZNF157P51786 506 aaPredicted RBP10.23□□□□□ -0.77
CUX1-206ENST00000437600 PPIL2Q13356 520 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms