RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 URGCPQ8TCY9 931 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 LRRC15Q8TF66 581 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 DRC1Q96MC2 740 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
EXT1-202ENST00000436216 INPP5FQ9Y2H2 1132 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 GIT1Q9Y2X7 761 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 HES2Q9Y543 173 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 SRPRBQ9Y5M8 271 aaKnown RBP13.68□□□□□ -0.22
EXT1-202ENST00000436216 ZMYM2Q9UBW7 1377 aa13.68□□□□□ -0.22
EXT1-202ENST00000436216 ARL5CA6NH57 179 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 KCNA5P22460 613 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.223e-6■■■■□ 22.4
EXT1-202ENST00000436216 PEX3P56589 373 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 NT5DC1Q5TFE4 455 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 TMEM173Q86WV6 379 aaPredicted RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 CDR2LQ86X02 465 aaPredicted RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 EFHBQ8N7U6 833 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 SPIRE2Q8WWL2 714 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 KCNN1Q92952 543 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 PPP2R3CQ969Q6 453 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 CDK5RAP3Q96JB5 506 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 PLIN2Q99541 437 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 TMEM175Q9BSA9 504 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 KIFC3Q9BVG8 833 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 TRIM6Q9C030 488 aaPredicted RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 NXF3Q9H4D5 531 aaKnown RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 TMEM134Q9H6X4 195 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 NGRNQ9NPE2 291 aaKnown RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
EXT1-202ENST00000436216 PCDHGC5Q9Y5F6 944 aa13.67□□□□□ -0.22
EXT1-202ENST00000436216 C5orf42Q9H799 3197 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 NT5C1B-RDH14C9J2C7 533 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 K7ERI5 159 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 N4BP3O15049 544 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.22
EXT1-202ENST00000436216 NPTXRO95502 500 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 ALDH2P05091 517 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 SLC11A1P49279 550 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
EXT1-202ENST00000436216 DSC1Q08554 894 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 KCNC3Q14003 757 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 SLC39A14Q15043 492 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 MRPL43Q8N983 215 aaKnown RBP13.66□□□□□ -0.22
EXT1-202ENST00000436216 MICAL1Q8TDZ2 1067 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 ADAMTS19Q8TE59 1207 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 BCL7CQ8WUZ0 217 aaPredicted RBP13.66□□□□□ -0.22
EXT1-202ENST00000436216 TMEM169Q96HH4 297 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 IGSF21Q96ID5 467 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 USP28Q96RU2 1077 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 GAD1Q99259 594 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 MIOSQ9NXC5 875 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 CLDND1Q9NY35 253 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 KCNG1Q9UIX4 513 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 USP20Q9Y2K6 914 aa13.66□□□□□ -0.22
EXT1-202ENST00000436216 PHLPP2Q6ZVD8 1323 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 SFI1A8K8P3 1242 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 LINC01565O15544 149 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 EFEMP2O95967 443 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 POMCP01189 267 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 PLS3P13797 630 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 PLCG1P19174 1290 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 MARCKSP29966 332 aaPredicted RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 MLH1P40692 756 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 NASPP49321 788 aaPredicted RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 DLX2Q07687 328 aaPredicted RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 KARSQ15046 597 aaKnown RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 PUS10Q3MIT2 529 aaKnown RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 USP49Q70CQ1 688 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 TAS1R3Q7RTX0 852 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 COLGALT2Q8IYK4 626 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 RAD54LQ92698 747 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 EPSTI1Q96J88 318 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 MSLNLQ96KJ4 702 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 ZFP42Q96MM3 310 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 CDCA3Q99618 268 aaPredicted RBP13.65□□□□□ -0.22
EXT1-202ENST00000436216 TCF25Q9BQ70 676 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 IGFLR1Q9H665 355 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 TLE6Q9H808 572 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 KMT5AQ9NQR1 393 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 ODF2LQ9ULJ1 636 aa13.65□□□□□ -0.22
EXT1-202ENST00000436216 TNFSF13BQ9Y275 285 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms