RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 PDZD4Q76G19 769 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 TAS1R1Q7RTX1 841 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 IGDCC3Q8IVU1 814 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 ZNF480Q8WV37 535 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 SNX33Q8WV41 574 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 ELAC2Q9BQ52 826 aaKnown RBP5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 CARD11Q9BXL7 1154 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 NUP62CLQ9H1M0 184 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 SCOCQ9UIL1 159 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 CDC42EP3Q9UKI2 254 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 FAM184BQ9ULE4 1060 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 LIMCH1Q9UPQ0 1083 aa5.66□□□□□ -1.5
HMGB1P45-201ENST00000435986 A0A1W2PR48 441 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 NRP1O14786 923 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 LY86O95711 162 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 C8AP07357 584 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 CTSSP25774 331 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 RPL13P26373 211 aaKnown RBP5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 SMARCA1P28370 1054 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 GJA9P57773 515 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 ANTXR2P58335 489 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 CDC42EP1Q00587 391 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 CD69Q07108 199 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 MESP2Q0VG99 397 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 IFIT5Q13325 482 aaKnown RBP5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 MORC3Q14149 939 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 LLGL1Q15334 1064 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 IL31Q6EBC2 164 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 CNKSR3Q6P9H4 555 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 GADL1Q6ZQY3 521 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 DPF2Q92785 391 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 CGRRF1Q99675 332 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 TMEM168Q9H0V1 697 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 BCO1Q9HAY6 547 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 TMEM140Q9NV12 185 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 MAGEL2Q9UJ55 1249 aa5.65□□□□□ -1.5
HMGB1P45-201ENST00000435986 A0A0A6YYK5 440 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 TEX33O43247 280 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 LDHAP00338 332 aaKnown RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 GAAP10253 952 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 GYPEP15421 78 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 RPL17P18621 184 aaKnown RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 ADSLP30566 484 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 LIMS1P48059 325 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 USP14P54578 494 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 EPHB3P54753 998 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 AK2P54819 239 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 TOP3AQ13472 1001 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 UBE3CQ15386 1083 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 ZRSR2Q15696 482 aaKnown RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 RNF220Q5VTB9 566 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 KRT40Q6A162 431 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 OVCH2Q7RTZ1 564 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 FAM124AQ86V42 546 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 CERS3Q8IU89 383 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 PQLC1Q8N2U9 271 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 FAM156AQ8NDB6 213 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 KLHDC4Q8TBB5 520 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 NKD2Q969F2 451 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 SLC7A6OSQ96CW6 309 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 PPP1R16BQ96T49 567 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 MYD88Q99836 296 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 FDXACB1Q9BRP7 624 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 SOX7Q9BT81 388 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 SGPP1Q9BX95 441 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 SENP6Q9GZR1 1112 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 DMRT3Q9NQL9 472 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 LANCL2Q9NS86 450 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 CALCOCO1Q9P1Z2 691 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 PCDHA13Q9Y5I0 950 aa5.64□□□□□ -1.51
HMGB1P45-201ENST00000435986 LOC102724159A0A0B4J2E5 919 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 CFAP69A5D8W1 941 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 FOXN3O00409 490 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 PMM2O15305 246 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 PQBP1O60828 265 aaKnown RBP5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 ALDH1A2O94788 518 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 FTH1P19P0C7X4 201 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 EDNRBP24530 442 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 CRHR1P34998 444 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 STAT5BP51692 787 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 NEK3P51956 506 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 CAP1Q01518 475 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 DUSP2Q05923 314 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 BTKQ06187 659 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 IL10RAQ13651 578 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 FGL2Q14314 439 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 USP10Q14694 798 aaKnown RBP5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 PWP2Q15269 919 aaKnown RBP5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 ZNF124Q15973 351 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 C3orf36Q3SXR2 165 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 ZNF385BQ569K4 471 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 NPNTQ6UXI9 565 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 PLA2G15Q8NCC3 412 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 OR7D4Q8NG98 312 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 PPP1R35Q8TAP8 253 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 CLPTM1LQ96KA5 538 aa5.63□□□□□ -1.51
HMGB1P45-201ENST00000435986 NOX5Q96PH1 765 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms