RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 FBXO41Q8TF61 875 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 TLR10Q9BXR5 811 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 SPATC1LQ9H0A9 340 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 AKT3Q9Y243 479 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 DDX3XO00571 662 aaKnown RBP eCLIP13.12□□□□□ -0.313e-9■■□□□ 13.2
CLDN4-203ENST00000435050 FECHP22830 423 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 C10orf76Q5T2E6 689 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 CCDC26Q8TAB7 109 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 UHMK1Q8TAS1 419 aaKnown RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 THAP2Q9H0W7 228 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 RBAKQ9NYW8 714 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 ZNF214Q9UL59 606 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 KIF4AO95239 1232 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 BRD2P25440 801 aaKnown RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 COPB2P35606 906 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 GABPB1Q06547 395 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 NEDD9Q14511 834 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 STIM2Q9P246 746 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 DBR1Q9UK59 544 aaKnown RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 H0YCG3 227 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 ZNF862O60290 1169 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 SGPL1O95470 568 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 TMEM191BP0C7N4 346 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 MUTP22033 750 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
CLDN4-203ENST00000435050 AMPD2Q01433 879 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 TTC19Q6DKK2 380 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-203ENST00000435050 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 TMEM270Q6UE05 265 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 KCTD17Q8N5Z5 321 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 GRID2IPA4D2P6 1211 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 ZSCAN5CA6NGD5 496 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-203ENST00000435050 MAFGO15525 162 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 USP2O75604 605 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-203ENST00000435050 ADRB2P07550 413 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 TMOD1P28289 359 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 CCDC114Q96M63 670 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 THAP12O43422 761 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 OATP04181 439 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 HPDP32754 393 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-203ENST00000435050 MAPK7Q13164 816 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 IRF2BP2Q7Z5L9 587 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 CHST13Q8NET6 341 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 TRAPPC12Q8WVT3 735 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-203ENST00000435050 RAB20Q9NX57 234 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 MAP3K20Q9NYL2 800 aaKnown RBP13.11□□□□□ -0.31
CLDN4-203ENST00000435050 TAS2R14Q9NYV8 317 aa13.11□□□□□ -0.31
CLDN4-203ENST00000435050 ZEB2O60315 1214 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 BUB1BO60566 1050 aaPredicted RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 CYP2C8P10632 490 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 NSFP46459 744 aaKnown RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 FSTL1Q12841 308 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 PPP1R7Q15435 360 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 SPOPLQ6IQ16 392 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 CCDC105Q8IYK2 499 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 SEPT1Q8WYJ6 367 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 UBE4BO95155 1302 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 TATDN2Q93075 761 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 BTBD6Q96KE9 485 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 UTP11Q9Y3A2 253 aaKnown RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 GOLGA6CA6NDK9 693 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 GOLGA6DP0CG33 693 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 BEND6Q5SZJ8 279 aaPredicted RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 MAP1SQ66K74 1059 aaPredicted RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 RFFLQ8WZ73 363 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 OPTNQ96CV9 577 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 GOLGA6AQ9NYA3 693 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 AMACRQ9UHK6 382 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 PLCB3Q01970 1234 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 SNX1Q13596 522 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 TAX1BP1Q86VP1 789 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 ERO1BQ86YB8 467 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 PPP1R13LQ8WUF5 828 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 PSPC1Q8WXF1 523 aaKnown RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 COPS5Q92905 334 aa13.1□□□□□ -0.31
CLDN4-203ENST00000435050 ZBED3Q96IU2 234 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms