RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 C16orf86Q6ZW13 317 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 ARHGEF19Q8IW93 802 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 TGS1Q96RS0 853 aaKnown RBP11.24□□□□□ -0.61
SCAF4-203ENST00000434667 UBE2TQ9NPD8 197 aaPredicted RBP11.24□□□□□ -0.61
SCAF4-203ENST00000434667 CHST7Q9NS84 486 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 ASIC3Q9UHC3 531 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
SCAF4-203ENST00000434667 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 WDR91A4D1P6 747 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 ASAP2O43150 1006 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 GNA14O95837 355 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 BRAFP15056 766 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 FOXN2P32314 431 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 ZNF131P52739 623 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 ECHDC2Q86YB7 292 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 SEC14L1Q92503 715 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 SLC5A4Q9NY91 659 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 DDX39AO00148 427 aaKnown RBP11.23□□□□□ -0.61
SCAF4-203ENST00000434667 SMIM24O75264 130 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 ENTPD5O75356 428 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 LONP2Q86WA8 852 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 ZFPM1Q8IX07 1006 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 ALG13Q9NP73 1137 aaKnown RBP11.23□□□□□ -0.61
SCAF4-203ENST00000434667 AAASQ9NRG9 546 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 GOLGA8IPA6NC78 632 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 GOLGA8JA6NMD2 632 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 GCLMP48507 274 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 QRICH1Q2TAL8 776 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
SCAF4-203ENST00000434667 SETDB2Q96T68 719 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 PCDHB18PQ96TA0 734 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 KLHL11Q9NVR0 708 aa11.23□□□□□ -0.61
SCAF4-203ENST00000434667 SPOPO43791 374 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 SGPL1O95470 568 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
SCAF4-203ENST00000434667 SPATA21Q7Z572 469 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 ERP27Q96DN0 273 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 PGM2Q96G03 612 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 NENFQ9UMX5 172 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 DNM3Q9UQ16 869 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 MYO3BQ8WXR4 1341 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 DPPA5A6NC42 116 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 NUDT17P0C025 328 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
SCAF4-203ENST00000434667 LACTBP83111 547 aaPredicted RBP11.22□□□□□ -0.61
SCAF4-203ENST00000434667 DDB1Q16531 1140 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 FRMD5Q7Z6J6 570 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 OSBPL1AQ9BXW6 950 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 ANO3Q9BYT9 981 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 ZNF652Q9Y2D9 606 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 PPP1R12AO14974 1030 aaPredicted RBP11.22□□□□□ -0.61
SCAF4-203ENST00000434667 TBCAO75347 108 aaKnown RBP11.22□□□□□ -0.61
SCAF4-203ENST00000434667 STX2P32856 288 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 PRKCIP41743 596 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 PSMC4P43686 418 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 NOVP48745 357 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 FMO5P49326 533 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 MARSP56192 900 aaKnown RBP11.22□□□□□ -0.61
SCAF4-203ENST00000434667 PLCB3Q01970 1234 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 MIS18BP1Q6P0N0 1132 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 FMNL3Q8IVF7 1028 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 C4orf33Q8N1A6 199 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 RNF217Q8TC41 542 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 INTS2Q9H0H0 1204 aaKnown RBP11.22□□□□□ -0.61
SCAF4-203ENST00000434667 MYLK2Q9H1R3 596 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
SCAF4-203ENST00000434667 PNMA6FA0A0J9YX94 578 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 TMEM150BA6NC51 233 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 TP73O15350 636 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 SMNDC1O75940 238 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCAF4-203ENST00000434667 UFL1O94874 794 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 EPHB2P29323 1055 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 TM4SF1P30408 202 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 PDE6CP51160 858 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 RHBDL3P58872 404 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 ITIH4Q14624 930 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 TMED2Q15363 201 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 C6orf118Q5T5N4 469 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 LOC285556D6RIA3 1793 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 PHF2O75151 1096 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 BANF1O75531 89 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 ATP2A2P16615 1042 aaKnown RBP11.21□□□□□ -0.61
SCAF4-203ENST00000434667 RAD23BP54727 409 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 MXRA7P84157 204 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 ZNF543Q08ER8 600 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 BNIP1Q12981 228 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 DHX38Q92620 1227 aaKnown RBP11.21□□□□□ -0.61
SCAF4-203ENST00000434667 NT5C3AQ9H0P0 336 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 IRAK4Q9NWZ3 460 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 R3HDM2Q9Y2K5 976 aaKnown RBP11.21□□□□□ -0.61
SCAF4-203ENST00000434667 PCDHA3Q9Y5H8 950 aa11.21□□□□□ -0.61
SCAF4-203ENST00000434667 BZW2Q9Y6E2 419 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms