RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 APOL6Q9BWW8 343 aa22.35■■□□□ 1.17
LMBR1-208ENST00000434278 NXF3Q9H4D5 531 aaKnown RBP22.35■■□□□ 1.17
LMBR1-208ENST00000434278 UBN1Q9NPG3 1134 aa22.35■■□□□ 1.17
LMBR1-208ENST00000434278 MIOSQ9NXC5 875 aa22.35■■□□□ 1.17
LMBR1-208ENST00000434278 KANSL3Q9P2N6 904 aa22.35■■□□□ 1.17
LMBR1-208ENST00000434278 ARL5CA6NH57 179 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 INPPL1O15357 1258 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 EDN1P05305 212 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 MLH1P40692 756 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 NAMPTP43490 491 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 SMAD4Q13485 552 aaKnown RBP22.34■■□□□ 1.17
LMBR1-208ENST00000434278 KCNC3Q14003 757 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 SMAD2Q15796 467 aaKnown RBP22.34■■□□□ 1.17
LMBR1-208ENST00000434278 FAM187BQ17R55 369 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 GJD3Q8N144 294 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 KHSRPQ92945 711 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■■■□□ 17.9
LMBR1-208ENST00000434278 KIFC3Q9BVG8 833 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 TRIM6Q9C030 488 aaPredicted RBP22.34■■□□□ 1.17
LMBR1-208ENST00000434278 CCDC113Q9H0I3 377 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 C2orf40Q9H1Z8 148 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 DNM3Q9UQ16 869 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 FAM50BQ9Y247 325 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 USP20Q9Y2K6 914 aa22.34■■□□□ 1.17
LMBR1-208ENST00000434278 VWA3AA6NCI4 1184 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 C2orf71A6NGG8 1288 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 COASYQ13057 564 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 SMC1AQ14683 1233 aaKnown RBP22.33■■□□□ 1.17
LMBR1-208ENST00000434278 DDX53Q86TM3 631 aaKnown RBP22.33■■□□□ 1.17
LMBR1-208ENST00000434278 VPS52Q8N1B4 723 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 MRPL43Q8N983 215 aaKnown RBP22.33■■□□□ 1.17
LMBR1-208ENST00000434278 DEPTORQ8TB45 409 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 ZFP42Q96MM3 310 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 PNMA5Q96PV4 448 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 VN1R3Q9BXE9 311 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 ZBP1Q9H171 429 aa22.33■■□□□ 1.17
LMBR1-208ENST00000434278 CARNS1A5YM72 827 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 AKAP5P24588 427 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 ZP2Q05996 745 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 PPP2R5AQ15172 486 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 ZRSR1Q15695 479 aaKnown RBP22.32■■□□□ 1.16
LMBR1-208ENST00000434278 MAPK6Q16659 721 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 HYIQ5T013 277 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 ARL6IP4Q66PJ3 421 aaKnown RBP22.32■■□□□ 1.16
LMBR1-208ENST00000434278 DAW1Q8N136 415 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 SMRP1Q8NCR6 262 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 AUTS2Q8WXX7 1259 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 KIFAP3Q92845 792 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 FAM193BQ96PV7 902 aaPredicted RBP22.32■■□□□ 1.16
LMBR1-208ENST00000434278 TMEM175Q9BSA9 504 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 RUSC1Q9BVN2 902 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 PDZD7Q9H5P4 517 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 GIT1Q9Y2X7 761 aa22.32■■□□□ 1.16
LMBR1-208ENST00000434278 ACKR2O00590 384 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 NRP1O14786 923 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 CXCL14O95715 111 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 ALDH2P05091 517 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 PRKCBP05771 671 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 LIG1P18858 919 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 SSTR3P32745 418 aaPredicted RBP22.31■■□□□ 1.16
LMBR1-208ENST00000434278 SCNN1GP51170 649 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 PRPF4BQ13523 1007 aaKnown RBP22.31■■□□□ 1.16
LMBR1-208ENST00000434278 RINT1Q6NUQ1 792 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 LLGL2Q6P1M3 1020 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 TMEM184AQ6ZMB5 413 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 COLGALT2Q8IYK4 626 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 GSTCDQ8NEC7 633 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 IFT74Q96LB3 600 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 EPHX3Q9H6B9 360 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 PRKAG3Q9UGI9 489 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 FAN1Q9Y2M0 1017 aa22.31■■□□□ 1.16
LMBR1-208ENST00000434278 FSD2A1L4K1 749 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 VPS37CA5D8V6 355 aaPredicted RBP22.3■■□□□ 1.16
LMBR1-208ENST00000434278 HIP1RO75146 1068 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 DSC1Q08554 894 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 C1orf186Q6ZWK4 172 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 BRAPQ7Z569 592 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 ADHFE1Q8IWW8 467 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 HACE1Q8IYU2 909 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 PLIN2Q99541 437 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 KLK14Q9P0G3 267 aa22.3■■□□□ 1.16
LMBR1-208ENST00000434278 C19orf67A6NJJ6 358 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 N4BP3O15049 544 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 CLASP2O75122 1294 aaKnown RBP22.29■■□□□ 1.16
LMBR1-208ENST00000434278 CTSAP10619 480 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 CA8P35219 290 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 MAPK7Q13164 816 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 EEF1DP3Q658K8 133 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 MARCH5Q9NX47 278 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 PARP2Q9UGN5 583 aa22.29■■□□□ 1.16
LMBR1-208ENST00000434278 PRG3Q9Y2Y8 225 aaPredicted RBP22.29■■□□□ 1.16
LMBR1-208ENST00000434278 TDRD15B5MCY1 1934 aaKnown RBP22.28■■□□□ 1.16
LMBR1-208ENST00000434278 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.28■■□□□ 1.16
LMBR1-208ENST00000434278 OR1G1P47890 313 aa22.28■■□□□ 1.16
LMBR1-208ENST00000434278 EFNA5P52803 228 aa22.28■■□□□ 1.16
LMBR1-208ENST00000434278 PEX3P56589 373 aa22.28■■□□□ 1.16
LMBR1-208ENST00000434278 TMEM132AQ24JP5 1023 aa22.28■■□□□ 1.16
LMBR1-208ENST00000434278 NT5DC1Q5TFE4 455 aa22.28■■□□□ 1.16
LMBR1-208ENST00000434278 ANKRD54Q6NXT1 300 aa22.28■■□□□ 1.16
LMBR1-208ENST00000434278 USP15Q9Y4E8 981 aaPredicted RBP22.28■■□□□ 1.16
LMBR1-208ENST00000434278 HCFC2Q9Y5Z7 792 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms