RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 CTTNBP2NLQ9P2B4 639 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 ZNF70Q9UC06 446 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 NOCTQ9UK39 431 aaKnown RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 GTF3C4Q9UKN8 822 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 CNTNAP1P78357 1384 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 WDR81Q562E7 1941 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 ITGB5P18084 799 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 ABCD1P33897 745 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 MXI1P50539 228 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 MFAP3P55082 362 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 SLMAPQ14BN4 828 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 AOC3Q16853 763 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 C1orf220Q5T0J3 134 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 ICE2Q659A1 982 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 RSBN1LQ6PCB5 846 aaPredicted RBP14.72□□□□□ -0.05
COL6A3-207ENST00000433762 USP37Q86T82 979 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 TMC2Q8TDI7 906 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 EPS8L1Q8TE68 723 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 PLVAPQ9BX97 442 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 IKZF4Q9H2S9 585 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 C17orf75Q9HAS0 396 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 AGO4Q9HCK5 861 aaKnown RBP14.72□□□□□ -0.05
COL6A3-207ENST00000433762 KCNH7Q9NS40 1196 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 TAS2R14Q9NYV8 317 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 MTUS1Q9ULD2 1270 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 ZHX2Q9Y6X8 837 aa14.72□□□□□ -0.05
COL6A3-207ENST00000433762 HPDP32754 393 aaPredicted RBP14.71□□□□□ -0.05
COL6A3-207ENST00000433762 LIG3P49916 1009 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 JAK3P52333 1124 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 PMS2P54278 862 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 PPP3CAQ08209 521 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ADCY2Q08462 1091 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 IFFO1Q0D2I5 559 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 RASA3Q14644 834 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ENOSF1Q7L5Y1 443 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 KSR1Q8IVT5 923 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 RPUSD2Q8IZ73 545 aaKnown RBP14.71□□□□□ -0.05
COL6A3-207ENST00000433762 BANK1Q8NDB2 785 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 GMLQ99445 158 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 TRIM51Q9BSJ1 452 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 VPS33BQ9H267 617 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ZNFX1Q9P2E3 1918 aaKnown RBP14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ASNSP08243 561 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 SFNP31947 248 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 CAP2P40123 477 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 GPC3P51654 580 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ODF2Q5BJF6 829 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 DENND2CQ68D51 928 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ZDHHC24Q6UX98 284 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 HAUS6Q7Z4H7 955 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 PALB2Q86YC2 1186 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ARHGEF19Q8IW93 802 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 DPH5Q9H2P9 285 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 EPB41L4BQ9H329 900 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 POLD4Q9HCU8 107 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ERVK-5Q9HDB9 667 aa14.71□□□□□ -0.05
COL6A3-207ENST00000433762 NOVA2Q9UNW9 492 aaKnown RBP14.71□□□□□ -0.05
COL6A3-207ENST00000433762 ARID2Q68CP9 1835 aa14.71□□□□□ -0.06
COL6A3-207ENST00000433762 YDJCA8MPS7 323 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 AGTP01019 485 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 PRPF4BQ13523 1007 aaKnown RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 TKFCQ3LXA3 575 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 SWT1Q5T5J6 900 aaKnown RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 C6orf118Q5T5N4 469 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 XRRA1Q6P2D8 792 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 PRELID2Q8N945 189 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 OR2W6PQ8NHA6 318 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 MAIP1Q8WWC4 291 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 BBXQ8WY36 941 aaPredicted RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 LPAR1Q92633 364 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 CEP89Q96ST8 783 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 CCDC134Q9H6E4 229 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 SEPT11Q9NVA2 429 aaKnown RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 GRHL1Q9NZI5 618 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 NR2E1Q9Y466 385 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 PCDHA3Q9Y5H8 950 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 WDR46O15213 610 aaKnown RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 ZC3H11AO75152 810 aaKnown RBP eCLIP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 LRRN2O75325 713 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 CHRNB2P17787 502 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 MAN1A1P33908 653 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 MAGOHP61326 146 aaKnown RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 DLGAP5Q15398 846 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 ERMARDQ5T6L9 678 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 SYDE1Q6ZW31 735 aaPredicted RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 SLC20A1Q8WUM9 679 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 TATDN2Q93075 761 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 MAGOHBQ96A72 148 aaKnown RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 ROPN1BQ9BZX4 212 aaPredicted RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 PDGFDQ9GZP0 370 aaPredicted RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 TMEM117Q9H0C3 514 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 ROPN1Q9HAT0 212 aaPredicted RBP14.7□□□□□ -0.06
COL6A3-207ENST00000433762 TMEM8AQ9HCN3 771 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 CCPG1Q9ULG6 757 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 ATP8A1Q9Y2Q0 1164 aa14.7□□□□□ -0.06
COL6A3-207ENST00000433762 ANKRD65E5RJM6 399 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 FDX1P10109 184 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 MMP13P45452 471 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 SEC24CP53992 1094 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 DLG4P78352 724 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms