RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PJA2O43164 708 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-203ENST00000431146 PRKCIP41743 596 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 CYP24A1Q07973 514 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 MKRN4PQ13434 485 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-203ENST00000431146 ATP8B4Q8TF62 1192 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 UBXN4Q92575 508 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 SEMA4DQ92854 862 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 FAM167AQ96KS9 214 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 FBXL18Q96ME1 805 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 TARS2Q9BW92 718 aaKnown RBP18.09■□□□□ 0.49
USHBP1-203ENST00000431146 ANKFY1Q9P2R3 1169 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 TTLL13PA6NNM8 815 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 N4BP1O75113 896 aaKnown RBP18.08■□□□□ 0.49
USHBP1-203ENST00000431146 GJB1P08034 283 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 GARTP22102 1010 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 ADCYAP1R1P41586 468 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 ACOT2P49753 483 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 ARHGAP1Q07960 439 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 CETN1Q12798 172 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 KIAA0753Q2KHM9 967 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 TEX35Q5T0J7 233 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 LMBRD2Q68DH5 695 aaPredicted RBP18.08■□□□□ 0.49
USHBP1-203ENST00000431146 PLPPR4Q7Z2D5 763 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 DPP9Q86TI2 863 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 KAT5Q92993 513 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 MFSD14AQ96MC6 490 aa18.08■□□□□ 0.49
USHBP1-203ENST00000431146 PARK7Q99497 189 aaKnown RBP18.08■□□□□ 0.49
USHBP1-203ENST00000431146 DIS3Q9Y2L1 958 aaKnown RBP18.08■□□□□ 0.49
USHBP1-203ENST00000431146 BZW2Q9Y6E2 419 aaKnown RBP18.08■□□□□ 0.49
USHBP1-203ENST00000431146 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-203ENST00000431146 EFCAB8A8MWE9 144 aa18.08■□□□□ 0.48
USHBP1-203ENST00000431146 FOXN3O00409 490 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-203ENST00000431146 FERP16591 822 aa18.08■□□□□ 0.48
USHBP1-203ENST00000431146 MATR3P43243 847 aaKnown RBP eCLIP18.08■□□□□ 0.48
USHBP1-203ENST00000431146 NAP1L1P55209 391 aaKnown RBP18.08■□□□□ 0.48
USHBP1-203ENST00000431146 NLRP11P59045 1033 aaKnown RBP18.08■□□□□ 0.48
USHBP1-203ENST00000431146 MAMDC4Q6UXC1 1216 aa18.08■□□□□ 0.48
USHBP1-203ENST00000431146 RNPEPQ9H4A4 650 aa18.08■□□□□ 0.48
USHBP1-203ENST00000431146 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-203ENST00000431146 CPA4Q9UI42 421 aa18.08■□□□□ 0.48
USHBP1-203ENST00000431146 STRNO43815 780 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 SNAI1O95863 264 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-203ENST00000431146 KLRC1P26715 233 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 WNT7BP56706 349 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 ZBTB41Q5SVQ8 909 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 TRAPPC11Q7Z392 1133 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 ARID3AQ99856 593 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 NAGPAQ9UK23 515 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 P4HA2O15460 535 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 TACC1O75410 805 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 HARSP12081 509 aaKnown RBP18.07■□□□□ 0.48
USHBP1-203ENST00000431146 IGBP1P78318 339 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 SEZ6Q53EL9 994 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 PDCL2Q8N4E4 241 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 TRIM58Q8NG06 486 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 TAS1R2Q8TE23 839 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 SMARCAD1Q9H4L7 1026 aa18.07■□□□□ 0.48
USHBP1-203ENST00000431146 AGO2Q9UKV8 859 aaKnown RBP18.07■□□□□ 0.48
USHBP1-203ENST00000431146 LOC102724159A0A0B4J2E5 919 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 DDX3XO00571 662 aaKnown RBP eCLIP18.06■□□□□ 0.48
USHBP1-203ENST00000431146 ADCY3O60266 1144 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 ITGBL1O95965 494 aaPredicted RBP18.06■□□□□ 0.48
USHBP1-203ENST00000431146 LAMTOR4Q0VGL1 99 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 PWP2Q15269 919 aaKnown RBP18.06■□□□□ 0.48
USHBP1-203ENST00000431146 KRT39Q6A163 491 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 ALKBH5Q6P6C2 394 aaKnown RBP18.06■□□□□ 0.48
USHBP1-203ENST00000431146 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 RNF149Q8NC42 400 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 OLIG1Q8TAK6 271 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 LNX1Q8TBB1 728 aaPredicted RBP18.06■□□□□ 0.48
USHBP1-203ENST00000431146 CAPZA3Q96KX2 299 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 KATNBL1Q9H079 304 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 KCNG1Q9UIX4 513 aa18.06■□□□□ 0.48
USHBP1-203ENST00000431146 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 ZNF185O15231 689 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 EXTL3O43909 919 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 ZNF286BP0CG31 522 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 CHMP4BP1P59074 171 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 GRB14Q14449 540 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 FAM110CQ1W6H9 321 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 PAPD7Q5XG87 772 aaKnown RBP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 SV2AQ7L0J3 742 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 RHPN2Q8IUC4 686 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 GLYCTKQ8IVS8 523 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 ABRAQ8N0Z2 381 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 PPM1KQ8N3J5 372 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 METTL13Q8N6R0 699 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 TMC2Q8TDI7 906 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 AFG1LQ8WV93 481 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 MAML3Q96JK9 1138 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 TMEM8AQ9HCN3 771 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 VTA1Q9NP79 307 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 LUC7LQ9NQ29 371 aaKnown RBP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 SAR1BQ9Y6B6 198 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 IGF2BP3O00425 579 aaKnown RBP eCLIP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 NCK2O43639 380 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 LGALS2P05162 132 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms