RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	LONRF3	Q496Y0	759 aa		19.71	■□□□□ 0.75
MRPL28-203	ENST00000429738	TMEM173	Q86WV6	379 aa	Predicted RBP	19.71	■□□□□ 0.75
MRPL28-203	ENST00000429738	NOSTRIN	Q8IVI9	506 aa		19.71	■□□□□ 0.75
MRPL28-203	ENST00000429738	POLR3C	Q9BUI4	534 aa	Predicted RBP	19.71	■□□□□ 0.75
MRPL28-203	ENST00000429738	POMK	Q9H5K3	350 aa		19.71	■□□□□ 0.75
MRPL28-203	ENST00000429738	NT5C1B-RDH14	C9J2C7	533 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	TSPAN1	O60635	241 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	ZC3H11A	O75152	810 aa	Known RBP eCLIP	19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	MED24	O75448	989 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	BRD1	O95696	1058 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	NCL	P19338	710 aa	Known RBP	19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	GLRA2	P23416	452 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	U2AF2	P26368	475 aa	Known RBP eCLIP	19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	MTHFR	P42898	656 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	MBTD1	Q05BQ5	628 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	TFDP1	Q14186	410 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	BMS1	Q14692	1282 aa	Known RBP	19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	RABEP1	Q15276	862 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	AMHR2	Q16671	573 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	TTC38	Q5R3I4	469 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	C4orf32	Q8N8J7	132 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	FAM184A	Q8NB25	1140 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	SMG8	Q8ND04	991 aa	Known RBP	19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	DBR1	Q9UK59	544 aa	Known RBP	19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	CNTNAP2	Q9UHC6	1331 aa		19.7	■□□□□ 0.74
MRPL28-203	ENST00000429738	MYO15A	Q9UKN7	3530 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	PLXNA3	P51805	1871 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738		A0A087WWV3	80 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	B4GALT3	O60512	393 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	ERLIN2	O94905	339 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	CXCL14	O95715	111 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	GALT	P07902	379 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	RPA1	P27694	616 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	AFF1	P51825	1210 aa	Known RBP	19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	CNNM3	Q8NE01	707 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	CCDC51	Q96ER9	411 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	TMEM169	Q96HH4	297 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	IGSF21	Q96ID5	467 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	RSAD1	Q9HA92	442 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	INPP5F	Q9Y2H2	1132 aa		19.69	■□□□□ 0.74
MRPL28-203	ENST00000429738	INPPL1	O15357	1258 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	USO1	O60763	962 aa	Known RBP	19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	NOTUM	Q6P988	496 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	ZNF280B	Q86YH2	543 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	TMEM105	Q8N8V8	129 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	BCL7C	Q8WUZ0	217 aa	Predicted RBP	19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	CCDC43	Q96MW1	224 aa	Known RBP	19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	NACC1	Q96RE7	527 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	ZBP1	Q9H171	429 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	POLR3F	Q9H1D9	316 aa	Predicted RBP	19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	DNAJB4	Q9UDY4	337 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	IRAK3	Q9Y616	596 aa		19.68	■□□□□ 0.74
MRPL28-203	ENST00000429738	INO80B-WBP1	J3KQ70	363 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	DDHD2	O94830	711 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	MUT	P22033	750 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	SLC11A1	P49279	550 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	TOB1	P50616	345 aa	Predicted RBP	19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	FXR2	P51116	673 aa	Known RBP eCLIP	19.67	■□□□□ 0.74	1e-9	■■□□□ 11.7
MRPL28-203	ENST00000429738	FOXK2	Q01167	660 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	RNASEL	Q05823	741 aa	Known RBP	19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	ATAT1	Q5SQI0	421 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	POTEG	Q6S5H5	508 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	DDX53	Q86TM3	631 aa	Known RBP	19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	ZDHHC14	Q8IZN3	488 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	ERMN	Q8TAM6	284 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	URGCP	Q8TCY9	931 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	CPB2	Q96IY4	423 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	EIF2A	Q9BY44	585 aa	Known RBP	19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	CSRNP2	Q9H175	543 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	GPRC5C	Q9NQ84	441 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	KANSL3	Q9P2N6	904 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	IPP	Q9Y573	584 aa		19.67	■□□□□ 0.74
MRPL28-203	ENST00000429738	TDRD15	B5MCY1	1934 aa	Known RBP	19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	ASGR2	P07307	311 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	WEE2	P0C1S8	567 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	CTSA	P10619	480 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	ARF4	P18085	180 aa	Predicted RBP	19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	NBL1	P41271	181 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	NBR1	Q14596	966 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	RARS2	Q5T160	578 aa	Known RBP	19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	CDCA2	Q69YH5	1023 aa	Predicted RBP	19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	ASTL	Q6HA08	431 aa	Predicted RBP	19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	ASCL5	Q7RTU5	278 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	VPS52	Q8N1B4	723 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	PLCD3	Q8N3E9	789 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	C12orf76	Q8N812	135 aa	Predicted RBP	19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	TMEM87A	Q8NBN3	555 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	MCPH1	Q8NEM0	835 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	VN1R3	Q9BXE9	311 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	SMOC2	Q9H3U7	446 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	UBN1	Q9NPG3	1134 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	DZANK1	Q9NVP4	752 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	LIMD1	Q9UGP4	676 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	NOL7	Q9UMY1	257 aa	Known RBP	19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	UST	Q9Y2C2	406 aa		19.66	■□□□□ 0.74
MRPL28-203	ENST00000429738	ITGA4	P13612	1032 aa		19.65	■□□□□ 0.74
MRPL28-203	ENST00000429738	CA8	P35219	290 aa		19.65	■□□□□ 0.74
MRPL28-203	ENST00000429738	NCBP1	Q09161	790 aa	Known RBP	19.65	■□□□□ 0.74
MRPL28-203	ENST00000429738	GNL2	Q13823	731 aa	Known RBP	19.65	■□□□□ 0.74
MRPL28-203	ENST00000429738	ECM1	Q16610	540 aa		19.65	■□□□□ 0.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms