RNA–Protein interactions for RNA: ENST00000428946.5

LRRC23-204, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 969 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-204ENST00000428946 KCNC3Q14003 757 aa20.23■□□□□ 0.83
LRRC23-204ENST00000428946 SMC1AQ14683 1233 aaKnown RBP20.23■□□□□ 0.83
LRRC23-204ENST00000428946 UBXN11Q5T124 520 aa20.23■□□□□ 0.83
LRRC23-204ENST00000428946 AGMOQ6ZNB7 445 aa20.23■□□□□ 0.83
LRRC23-204ENST00000428946 KCNK18Q7Z418 384 aa20.23■□□□□ 0.83
LRRC23-204ENST00000428946 PLIN2Q99541 437 aa20.23■□□□□ 0.83
LRRC23-204ENST00000428946 CLIC4Q9Y696 253 aa20.23■□□□□ 0.83
LRRC23-204ENST00000428946 C2orf71A6NGG8 1288 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 STX6O43752 255 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 ZNF623O75123 536 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 ERLIN2O94905 339 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 GRIN1Q05586 938 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 MBTD1Q05BQ5 628 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 ANKRD54Q6NXT1 300 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 SYCE2Q6PIF2 218 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 ZNF280BQ86YH2 543 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 IFNLR1Q8IU57 520 aaPredicted RBP20.22■□□□□ 0.83
LRRC23-204ENST00000428946 SPRYD3Q8NCJ5 442 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 BSNDQ8WZ55 320 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 CPB2Q96IY4 423 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 RPGRIP1Q96KN7 1286 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 PNMA5Q96PV4 448 aa20.22■□□□□ 0.83
LRRC23-204ENST00000428946 TDRD15B5MCY1 1934 aaKnown RBP20.21■□□□□ 0.83
LRRC23-204ENST00000428946 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.21■□□□□ 0.83
LRRC23-204ENST00000428946 FSD2A1L4K1 749 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 LRRIQ4A6NIV6 560 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 PRR33A8MZF0 331 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 TSPAN1O60635 241 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 GALTP07902 379 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 SRGAP2BP0DMP2 458 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 SP100P23497 879 aaPredicted RBP20.21■□□□□ 0.83
LRRC23-204ENST00000428946 SLC11A1P49279 550 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 VPS52Q8N1B4 723 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 MRPL43Q8N983 215 aaKnown RBP20.21■□□□□ 0.83
LRRC23-204ENST00000428946 URGCPQ8TCY9 931 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 PGBD4Q96DM1 585 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 IGSF21Q96ID5 467 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 EIF2AQ9BY44 585 aaKnown RBP20.21■□□□□ 0.83
LRRC23-204ENST00000428946 ZBP1Q9H171 429 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 RSAD1Q9HA92 442 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 HCFC2Q9Y5Z7 792 aa20.21■□□□□ 0.83
LRRC23-204ENST00000428946 CLASP2O75122 1294 aaKnown RBP20.2■□□□□ 0.82
LRRC23-204ENST00000428946 DDHD2O94830 711 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 BMP15O95972 392 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 POMCP01189 267 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 CEBPZQ03701 1054 aaKnown RBP20.2■□□□□ 0.82
LRRC23-204ENST00000428946 AMHR2Q16671 573 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 HYIQ5T013 277 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 TMEM184AQ6ZMB5 413 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 CABP7Q86V35 215 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 SUSD6Q92537 303 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 PHF7Q9BWX1 381 aaPredicted RBP20.2■□□□□ 0.82
LRRC23-204ENST00000428946 VN1R3Q9BXE9 311 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 NFKBIZQ9BYH8 718 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 S1PR5Q9H228 398 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 HES2Q9Y543 173 aa20.2■□□□□ 0.82
LRRC23-204ENST00000428946 TECTAO75443 2155 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 LOC730098B7Z3J9 87 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 B4GALT5O43286 388 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 CXCL14O95715 111 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 HSP90AA1P07900 732 aaKnown RBP20.19■□□□□ 0.82
LRRC23-204ENST00000428946 PLA2G5P39877 138 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 PTPAQ15257 358 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 MRPL10Q7Z7H8 261 aaKnown RBP20.19■□□□□ 0.82
LRRC23-204ENST00000428946 SMG8Q8ND04 991 aaKnown RBP20.19■□□□□ 0.82
LRRC23-204ENST00000428946 FAM122AQ96E09 287 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 APOL6Q9BWW8 343 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 IPPQ9Y573 584 aa20.19■□□□□ 0.82
LRRC23-204ENST00000428946 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 MARCKSP29966 332 aaPredicted RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 NCBP1Q09161 790 aaKnown RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 CBX2Q14781 532 aaPredicted RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 PCBP1Q15365 356 aaKnown RBP eCLIP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 HERC4Q5GLZ8 1057 aaPredicted RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 FOXD4L5Q5VV16 416 aaPredicted RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 RINT1Q6NUQ1 792 aa20.18■□□□□ 0.82
LRRC23-204ENST00000428946 DDX53Q86TM3 631 aaKnown RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 CDR2LQ86X02 465 aaPredicted RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 FOXD4L4Q8WXT5 416 aaPredicted RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 AK8Q96MA6 479 aa20.18■□□□□ 0.82
LRRC23-204ENST00000428946 RUSC1Q9BVN2 902 aa20.18■□□□□ 0.82
LRRC23-204ENST00000428946 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
LRRC23-204ENST00000428946 ZSCAN16Q9H4T2 348 aaPredicted RBP20.18■□□□□ 0.82
LRRC23-204ENST00000428946 WEE2P0C1S8 567 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 CTSAP10619 480 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 ITGA4P13612 1032 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 ARF4P18085 180 aaPredicted RBP20.17■□□□□ 0.82
LRRC23-204ENST00000428946 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
LRRC23-204ENST00000428946 AXLP30530 894 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 LONP1P36776 959 aaKnown RBP20.17■□□□□ 0.82
LRRC23-204ENST00000428946 MLH1P40692 756 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 UBA7P41226 1012 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 NAMPTP43490 491 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 TMEM119Q4V9L6 283 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 CDCA2Q69YH5 1023 aaPredicted RBP20.17■□□□□ 0.82
LRRC23-204ENST00000428946 NOTUMQ6P988 496 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 C1orf186Q6ZWK4 172 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 RSPH1Q8WYR4 309 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 KIFAP3Q92845 792 aa20.17■□□□□ 0.82
LRRC23-204ENST00000428946 CASP10Q92851 521 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms