RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PRIMPOLQ96LW4 560 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 CBWD1Q9BRT8 395 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 TCHPQ9BT92 498 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 MSTO1Q9BUK6 570 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 NOC4LQ9BVI4 516 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 FZD8Q9H461 694 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 AGPAT5Q9NUQ2 364 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 TMEM39AQ9NV64 488 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 MAGEC2Q9UBF1 373 aaPredicted RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 PIN4Q9Y237 131 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 NOC2LQ9Y3T9 749 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 UMODL1Q5DID0 1318 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 ANKRD63C9JTQ0 380 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 IKBKBO14920 756 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 N4BP3O15049 544 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 CETN3O15182 167 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 CLDN3O15551 220 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 EXOC3O60645 756 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 TOM1L1O75674 476 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 ARF4P18085 180 aaPredicted RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 CD52P31358 61 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 SNRPFP62306 86 aaKnown RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 FKBP3Q00688 224 aaKnown RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 MLLT1Q03111 559 aaPredicted RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 LPIN1Q14693 890 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 NOLC1Q14978 699 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 IQCB1Q15051 598 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 HSP90AA4PQ58FG1 418 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 FBXO47Q5MNV8 452 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 EEF1DP3Q658K8 133 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 CEP135Q66GS9 1140 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 SLFN12LQ6IEE8 588 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 SLC39A4Q6P5W5 647 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 NOTUMQ6P988 496 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 FOXR2Q6PJQ5 311 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 TRAF7Q6Q0C0 670 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 MPZL3Q6UWV2 235 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 APBB1IPQ7Z5R6 666 aaPredicted RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 CDR2LQ86X02 465 aaPredicted RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 CREBRFQ8IUR6 639 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 FAM114A1Q8IWE2 563 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 USP38Q8NB14 1042 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 SAAL1Q96ER3 474 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 MED15Q96RN5 788 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 ACO2Q99798 780 aaKnown RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 ADPGKQ9BRR6 497 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 RBSNQ9H1K0 784 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 PCIF1Q9H4Z3 704 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 PDZD7Q9H5P4 517 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 CGNQ9P2M7 1197 aaKnown RBP8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 TBX21Q9UL17 535 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 TRAF3IP3Q9Y228 551 aa8.65□□□□□ -1.02
HMGA1P4-201ENST00000428643 WDR81Q562E7 1941 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CENPFP49454 3210 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 A0A0B4J269 797 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 GOLGA8IPA6NC78 632 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 GOLGA6L3A6NEY3 463 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 GOLGA8JA6NMD2 632 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 RBAK-RBAKDNI3L0D1 243 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 GPR182O15218 404 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 NPTXRO95502 500 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 EPB41P11171 864 aaKnown RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 RAG1P15918 1043 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 IBSPP21815 317 aaPredicted RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 GARTP22102 1010 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 ADSSP30520 456 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CYP2C18P33260 490 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CCL23P55773 120 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 ADAM9Q13443 819 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 HSP90AA2PQ14568 343 aaPredicted RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 MBTPS1Q14703 1052 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 NCAPHQ15003 741 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 DCAF4L1Q3SXM0 396 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CCDC40Q4G0X9 1142 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 TWF2Q6IBS0 349 aaKnown RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 LRRC55Q6ZSA7 311 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 C7orf61Q8IZ16 206 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 XXYLT1Q8NBI6 393 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 ANKRD20A12PQ8NF67 263 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 SCLYQ96I15 445 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZBTB45Q96K62 511 aaPredicted RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CNOT6LQ96LI5 555 aaKnown RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CEP63Q96MT8 703 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 FAM213AQ9BRX8 229 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 HTATIP2Q9BUP3 242 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 SRRTQ9BXP5 876 aaKnown RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 IFIH1Q9BYX4 1025 aaKnown RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 TRIM6Q9C030 488 aaPredicted RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 WNT8AQ9H1J5 351 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 CDT1Q9H211 546 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 THAP9Q9H5L6 903 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 AGO3Q9H9G7 860 aaKnown RBP8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 ERVK-5Q9HDB9 667 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 FANCLQ9NW38 375 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 HSPBP1Q9NZL4 362 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 PRKAG2Q9UGJ0 569 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 AGO2Q9UKV8 859 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms