RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 SEPT11Q9NVA2 429 aaKnown RBP21.72■■□□□ 1.07
PMPCB-202ENST00000428154 CNOT7Q9UIV1 285 aaKnown RBP21.72■■□□□ 1.07
PMPCB-202ENST00000428154 SYNGAP1Q96PV0 1343 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 PTPRAP18433 802 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 ABCB4P21439 1286 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 GMPSP49915 693 aaPredicted RBP21.71■■□□□ 1.07
PMPCB-202ENST00000428154 RNASE9P60153 205 aaKnown RBP21.71■■□□□ 1.07
PMPCB-202ENST00000428154 MRPS25P82663 173 aaKnown RBP21.71■■□□□ 1.07
PMPCB-202ENST00000428154 ANO5Q75V66 913 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 ARHGEF19Q8IW93 802 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 EFCAB13Q8IY85 973 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 THAP2Q9H0W7 228 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 UTP11Q9Y3A2 253 aaKnown RBP21.71■■□□□ 1.07
PMPCB-202ENST00000428154 PPP2R3BQ9Y5P8 575 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 IGSF9BQ9UPX0 1349 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 RLFQ13129 1914 aa21.71■■□□□ 1.07
PMPCB-202ENST00000428154 ARID2Q68CP9 1835 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 DENND3A2RUS2 1198 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 FAM187AA6NFU0 413 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 NFKBIEO00221 500 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 LRRN2O75325 713 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 FTLP02792 175 aaPredicted RBP21.7■■□□□ 1.06
PMPCB-202ENST00000428154 KCNA2P16389 499 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 SNRNP48Q6IEG0 339 aaKnown RBP21.7■■□□□ 1.06
PMPCB-202ENST00000428154 RPUSD2Q8IZ73 545 aaKnown RBP21.7■■□□□ 1.06
PMPCB-202ENST00000428154 CEP170P1Q96L14 293 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 IFT74Q96LB3 600 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 NT5C1BQ96P26 610 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 GOLPH3Q9H4A6 298 aa21.7■■□□□ 1.06
PMPCB-202ENST00000428154 PPFIA4O75335 1185 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 GBP1P32455 592 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 PTENP60484 403 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 ERVK-9P63128 1117 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 DHX34Q14147 1143 aaKnown RBP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 HLTFQ14527 1009 aaKnown RBP eCLIP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 NBPF12Q5TAG4 269 aaPredicted RBP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 POTEAQ6S8J7 498 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 FBXL13Q8NEE6 735 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 RUNDC3BQ96NL0 473 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 HINFPQ9BQA5 517 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 TEX13BQ9BXU2 312 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 WNT8AQ9H1J5 351 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 ACAD9Q9H845 621 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 GPRC5CQ9NQ84 441 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 PDLIM7Q9NR12 457 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 GABBR1Q9UBS5 961 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 HMGB1P1B2RPK0 211 aaPredicted RBP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 FZD9O00144 591 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 ADRB2P07550 413 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 ADSSP30520 456 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 PLA2G4FQ68DD2 849 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 LRRC31Q6UY01 552 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 PLEKHO2Q8TD55 490 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 EPS8L1Q8TE68 723 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 ARHGEF26Q96DR7 871 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 CAPS2Q9BXY5 557 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 JPH1Q9HDC5 661 aaPredicted RBP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 HOXC10Q9NYD6 342 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 CTTNBP2NLQ9P2B4 639 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 UVRAGQ9P2Y5 699 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 SLC9A2Q9UBY0 812 aa21.69■■□□□ 1.06
PMPCB-202ENST00000428154 NOCTQ9UK39 431 aaKnown RBP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 ZNF214Q9UL59 606 aaPredicted RBP21.69■■□□□ 1.06
PMPCB-202ENST00000428154 COL11A1P12107 1806 aaPredicted RBP21.68■■□□□ 1.06
PMPCB-202ENST00000428154 ESYT3A0FGR9 886 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 TISP43B9A030 160 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 FGGP02679 453 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 FAM153BP0C7A2 387 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 DRG2P55039 364 aaKnown RBP21.68■■□□□ 1.06
PMPCB-202ENST00000428154 FAM153CQ494X1 144 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 MIS18BP1Q6P0N0 1132 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 GPD1LQ8N335 351 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 DHX38Q92620 1227 aaKnown RBP21.68■■□□□ 1.06
PMPCB-202ENST00000428154 RNPC3Q96LT9 517 aaKnown RBP21.68■■□□□ 1.06
PMPCB-202ENST00000428154 AP1M1Q9BXS5 423 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 ATP6V0A4Q9HBG4 840 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 TMOD4Q9NZQ9 345 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 FAM153AQ9UHL3 310 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 ALG6Q9Y672 507 aa21.68■■□□□ 1.06
PMPCB-202ENST00000428154 KIAA1217Q5T5P2 1943 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 ZSCAN5CA6NGD5 496 aaPredicted RBP21.67■■□□□ 1.06
PMPCB-202ENST00000428154 GOLGA6L10A6NI86 522 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 STBD1O95210 358 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 EGFRP00533 1210 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 POU5F1Q01860 360 aaKnown RBP21.67■■□□□ 1.06
PMPCB-202ENST00000428154 GCNT1Q02742 428 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 XKR3Q5GH77 459 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 NOL9Q5SY16 702 aaKnown RBP21.67■■□□□ 1.06
PMPCB-202ENST00000428154 SMYD5Q6GMV2 418 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 CATSPERGQ6ZRH7 1159 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 DNAAF5Q86Y56 855 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 CBWD2Q8IUF1 395 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 DDX47Q9H0S4 455 aaKnown RBP21.67■■□□□ 1.06
PMPCB-202ENST00000428154 RAB20Q9NX57 234 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 TAS2R14Q9NYV8 317 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 RIPK3Q9Y572 518 aa21.67■■□□□ 1.06
PMPCB-202ENST00000428154 SPATA31C2B4DYI2 1134 aa21.66■■□□□ 1.06
PMPCB-202ENST00000428154 ANKRD63C9JTQ0 380 aa21.66■■□□□ 1.06
PMPCB-202ENST00000428154 ERLIN2O94905 339 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms