RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 KYAT1Q16773 422 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 DCAF4L1Q3SXM0 396 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 NOMO2Q5JPE7 1267 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 CLLU1OSQ5K130 101 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 UBXN11Q5T124 520 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 FAM117BQ6P1L5 589 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 TMEM184AQ6ZMB5 413 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 KSR1Q8IVT5 923 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 COLGALT1Q8NBJ5 622 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 MRPS27Q92552 414 aaKnown RBP10.09□□□□□ -0.79
SMC1A-203ENST00000428014 HLA-CQ95604 372 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 PABPC5Q96DU9 382 aaKnown RBP10.09□□□□□ -0.79
SMC1A-203ENST00000428014 ZNF396Q96N95 335 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-203ENST00000428014 ZNF558Q96NG5 402 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 SH2D3AQ9BRG2 576 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 PYM1Q9BRP8 204 aaKnown RBP10.09□□□□□ -0.79
SMC1A-203ENST00000428014 ADPGKQ9BRR6 497 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 CUEDC2Q9H467 287 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 RSAD1Q9HA92 442 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 SEL1LQ9UBV2 794 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 CCDC39Q9UFE4 941 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 TNFSF13BQ9Y275 285 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 MYO7AQ13402 2215 aa10.09□□□□□ -0.79
SMC1A-203ENST00000428014 VPS37CA5D8V6 355 aaPredicted RBP10.08□□□□□ -0.8
SMC1A-203ENST00000428014 FSCN2O14926 492 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 OFD1O75665 1012 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 ITGB1P05556 798 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 DDIT3P35638 169 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 ALDH7A1P49419 539 aaKnown RBP10.08□□□□□ -0.8
SMC1A-203ENST00000428014 DSC1Q08554 894 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 MAPK7Q13164 816 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 CAMK1Q14012 370 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 E2F4Q16254 413 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 LEXMQ3ZCV2 418 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 FAM102BQ5T8I3 360 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 CNNM4Q6P4Q7 775 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 KCNT2Q6UVM3 1135 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 ZPBP2Q6X784 338 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 MAMSTRQ6ZN01 415 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 CABP7Q86V35 215 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 DAW1Q8N136 415 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 SLC39A11Q8N1S5 342 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 LINC00301Q8NCQ3 95 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 URGCPQ8TCY9 931 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 GDPD5Q8WTR4 605 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 ASB2Q96Q27 587 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 LRRC27Q9C0I9 530 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 MAGEF1Q9HAY2 307 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 SCUBE2Q9NQ36 999 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 TYW1Q9NV66 732 aaKnown RBP10.08□□□□□ -0.8
SMC1A-203ENST00000428014 SPG21Q9NZD8 308 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 CFAP45Q9UL16 551 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 FAM50BQ9Y247 325 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 SSX2IPQ9Y2D8 614 aa10.08□□□□□ -0.8
SMC1A-203ENST00000428014 UNC80Q8N2C7 3258 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 LRRIQ4A6NIV6 560 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 K7ERI5 159 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 FGF18O76093 207 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PAPLNO95428 1278 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 EFEMP2O95967 443 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PIGRP01833 764 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PLA2G4BP0C869 781 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 ITGA4P13612 1032 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PLS3P13797 630 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PROZP22891 400 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PAX3P23760 479 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 NPTX2P47972 431 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PRPF4BQ13523 1007 aaKnown RBP10.07□□□□□ -0.8
SMC1A-203ENST00000428014 XKR4Q5GH76 650 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 AGMOQ6ZNB7 445 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 CCDC73Q6ZRK6 1079 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 LRRC55Q6ZSA7 311 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 RNF168Q8IYW5 571 aaPredicted RBP10.07□□□□□ -0.8
SMC1A-203ENST00000428014 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
SMC1A-203ENST00000428014 KLHL23Q8NBE8 558 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
SMC1A-203ENST00000428014 KCNG4Q8TDN1 519 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 HVCN1Q96D96 273 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 RHOBTB2Q9BYZ6 727 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 PTPRHQ9HD43 1115 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 TLR9Q9NR96 1032 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 TBC1D13Q9NVG8 400 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 FBXO2Q9UK22 296 aaPredicted RBP10.07□□□□□ -0.8
SMC1A-203ENST00000428014 IPPQ9Y573 584 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 ATP6V1DQ9Y5K8 247 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 KIAA1671Q9BY89 1806 aa10.07□□□□□ -0.8
SMC1A-203ENST00000428014 E9PMD0 336 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 TMEM189-UBE2V1I3L0A0 370 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 GRM6O15303 877 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 HIP1RO75146 1068 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 NR1I2O75469 434 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 PRKCBP05771 671 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 HSP90AA1P07900 732 aaKnown RBP10.06□□□□□ -0.8
SMC1A-203ENST00000428014 SRGAP2BP0DMP2 458 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms