RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 ZNF410Q86VK4 478 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 PPFIBP1Q86W92 1011 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 DBF4BQ8NFT6 615 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 GDF15Q99988 308 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 KIFC3Q9BVG8 833 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 GCOM2Q9BZD3 368 aaPredicted RBP17.12■□□□□ 0.33
SHOX2-202ENST00000425436 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 RANBP2P49792 3224 aaKnown RBP17.12■□□□□ 0.33
SHOX2-202ENST00000425436 CCDC169A6NNP5 214 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 RPS6KA5O75582 802 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 IDEP14735 1019 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 LRRC63Q05C16 580 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 EHHADHQ08426 723 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 TFDP1Q14186 410 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 KRT31Q15323 416 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 PLEKHG4Q58EX7 1191 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 CENPPQ6IPU0 288 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 TSHZ1Q6ZSZ6 1077 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 OTOP2Q7RTS6 562 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 FAM228AQ86W67 206 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 CSGALNACT2Q8N6G5 542 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 IFT74Q96LB3 600 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■□□□□ 9.9
SHOX2-202ENST00000425436 TIPINQ9BVW5 301 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
SHOX2-202ENST00000425436 UBE2OQ9C0C9 1292 aaKnown RBP17.11■□□□□ 0.33
SHOX2-202ENST00000425436 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 PADI3Q9ULW8 664 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 ST3GAL5Q9UNP4 418 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 MAPK8IP1Q9UQF2 711 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 KIF2AO00139 706 aaPredicted RBP17.11■□□□□ 0.33
SHOX2-202ENST00000425436 FAM13AO94988 1023 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 FGBP02675 491 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 COPB1P53618 953 aaKnown RBP17.11■□□□□ 0.33
SHOX2-202ENST00000425436 PTENP60484 403 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 PAK2Q13177 524 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 ARID5BQ14865 1188 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 MYCT1Q8N699 235 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 TSG101Q99816 390 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 NAA15Q9BXJ9 866 aaKnown RBP17.11■□□□□ 0.33
SHOX2-202ENST00000425436 SRRTQ9BXP5 876 aaKnown RBP17.11■□□□□ 0.33
SHOX2-202ENST00000425436 PANK4Q9NVE7 773 aa17.11■□□□□ 0.33
SHOX2-202ENST00000425436 AKR1B15C9JRZ8 316 aaPredicted RBP17.1■□□□□ 0.33
SHOX2-202ENST00000425436 INO80B-WBP1J3KQ70 363 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 STX10O60499 249 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 PLS3P13797 630 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 PBX1P40424 430 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 NAMPTP43490 491 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 PHKA2P46019 1235 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 NPTX2P47972 431 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 C9orf50Q5SZB4 431 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 USP38Q8NB14 1042 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 DEPTORQ8TB45 409 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 SEPT8Q92599 483 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 PANX2Q96RD6 677 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 INO80BQ9C086 356 aaPredicted RBP17.1■□□□□ 0.33
SHOX2-202ENST00000425436 ERVK-5Q9HDB9 667 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 SQORQ9Y6N5 450 aa17.1■□□□□ 0.33
SHOX2-202ENST00000425436 A0A1W2PQC6 194 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 SLC16A4O15374 487 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 ARHGAP6O43182 974 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
SHOX2-202ENST00000425436 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
SHOX2-202ENST00000425436 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 SHHQ15465 462 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 ODR4Q5SWX8 454 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 ANKRD40Q6AI12 368 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 CNKSR3Q6P9H4 555 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 KIAA0895Q8NCT3 520 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 IQCDQ96DY2 449 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 TBC1D7Q9P0N9 293 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 USP20Q9Y2K6 914 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 ADGRA3Q8IWK6 1321 aa17.09■□□□□ 0.33
SHOX2-202ENST00000425436 FRMD3A2A2Y4 597 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 GPR182O15218 404 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 PFKMP08237 780 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 MBTD1Q05BQ5 628 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 POU5F1BQ06416 359 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 COASYQ13057 564 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 FAM26FQ5R3K3 315 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 CATSPER4Q7RTX7 472 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 CNGA4Q8IV77 575 aa17.08■□□□□ 0.32
SHOX2-202ENST00000425436 DUSP9Q99956 384 aaKnown RBP17.08■□□□□ 0.32
SHOX2-202ENST00000425436 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
SHOX2-202ENST00000425436 ZNF131P52739 623 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms